Gene: Pp3c5_5240

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c5_5240
  • Transcript Identifier Pp3c5_5240V3.2
  • Gene Type Coding gene
  • Location Chr05 : 3435267-3442040 : positive

Gene Family Information

  • ID HOM05D002700
  • #Genes/#Species 255/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c5_5240V3.2
  • pacid 32954279
  • alias Phpat.005G020800
  • alias Pp1s41_154V6
  • alias Phypa_162270
  • uniprot A9S1S1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009306
IBA
GOA Databaseprotein secretion
GO:0006891
IBA
GOA Databaseintra-Golgi vesicle-mediated transport
GO:0006888
IBA
GOA Databaseendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005198
IEA
GOA Databasestructural molecule activity
GO:0005198
IEA
InterProstructural molecule activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030117
IEA
GOA Databasemembrane coat
GO:0030117
IEA
InterPromembrane coat
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G34450
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G34450
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G34450
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G34450
GO:0000139
IBA
IEA
GOA DatabaseGolgi membrane
GO:0005783
IBA
GOA Databaseendoplasmic reticulum
GO:0005793
IBA
GOA Databaseendoplasmic reticulum-Golgi intermediate compartment
GO:0030126
IBA
IEA
GOA DatabaseCOPI vesicle coat
GO:0030126
IEA
InterProCOPI vesicle coat
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005737
IEA
GOA Databasecytoplasm
GO:0030663
IEA
GOA DatabaseCOPI-coated vesicle membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011989 Armadillo-like helical
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR017106 Coatomer gamma subunit
IPR037067 Coatomer, gamma subunit, appendage domain superfamily
IPR012295 TBP domain superfamily
IPR013040 Coatomer, gamma subunit, appendage, Ig-like subdomain
IPR016024 Armadillo-type fold
IPR013041 Clathrin adaptor, appendage, Ig-like subdomain superfamily
IPR009028 Coatomer/calthrin adaptor appendage, C-terminal subdomain
IPR032154 Coatomer subunit gamma, C-terminal
Mapman id Description
22.2.1.1.4.2 Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.subunit gamma