Gene: Pp3c5_3400

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c5_3400
  • Transcript Identifier Pp3c5_3400V3.4
  • Gene Type Coding gene
  • Location Chr05 : 2218865-2222983 : positive

Gene Family Information

  • ID HOM05D005885
  • #Genes/#Species 133/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c5_3400V3.4
  • pacid 32952577
  • alias Phpat.005G013200
  • alias Pp1s72_320V6
  • alias Phypa_184349
  • uniprot A0A2K1KIA8

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0000719
IBA
GOA Databasephotoreactive repair
GO:0009650
ISO
PLAZA Integrative OrthologyUV protection AT1G12370

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003904
IBA
IEA
GOA Databasedeoxyribodipyrimidine photo-lyase activity
GO:0003904
IEA
InterProdeoxyribodipyrimidine photo-lyase activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0071949
ISO
PLAZA Integrative OrthologyFAD binding Os10g0167600
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Os10g0167600
GO:0003913
ISO
PLAZA Integrative OrthologyDNA photolyase activity AT1G12370

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily
IPR006050 DNA photolyase, N-terminal
IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily
IPR008148 DNA photolyase class 2
Mapman id Description
14.9.2 DNA damage response.photoreactivation.class II photolyase (PHR1)