Gene: Pp3c5_2020
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c5_2020
- Transcript Identifier Pp3c5_2020V3.1
- Gene Type Coding gene
- Location Chr05 : 1287485-1288147 : negative
Gene Family Information
- ID HOM05D000980
- #Genes/#Species 614/90
- Phylogenetic origin
- ID ORTHO05D000649
- #Genes/#Species 711/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c5_2020V3.1
- pacid 32954512
- alias Phypa_229195
- alias Phpat.005G006600
- alias Pp1s72_118V6
- uniprot A9SF33
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT5G06320 |
| GO:0051607 | ISO | PLAZA Integrative Orthology | defense response to virus | AT3G11650 |
| GO:0009617 | ISO | PLAZA Integrative Orthology | response to bacterium | AT5G06320 |
| GO:0098542 | ISO | PLAZA Homology (enrichment) | defense response to other organism | HOM05D000980 |
| GO:0009751 | ISO | PLAZA Integrative Orthology | response to salicylic acid | AT5G06320 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT5G06320 |
| GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | AT2G35980 |
| GO:0051707 | ISO | PLAZA Integrative Orthology | response to other organism | AT2G35980 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G06320 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G06320 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G11650 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G11650 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G06320 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT5G06320 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT5G06320 |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004864 | Late embryogenesis abundant protein, LEA_2 subgroup |
| Mapman id | Description |
|---|---|
| 35.2 | not assigned.not annotate |