Gene: Pp3c5_15090

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c5_15090
  • Transcript Identifier Pp3c5_15090V3.3
  • Gene Type Coding gene
  • Location Chr05 : 10659112-10662846 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c5_15090V3.3
  • pacid 32955715
  • alias Pp1s169_110V6
  • alias Phpat.005G056600
  • alias Phypa_191892
  • uniprot A0A2K1KJR2

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010102
ISO
PLAZA Integrative Orthologylateral root morphogenesis AT2G33680
GO:0016125
ISO
PLAZA Integrative Orthologysterol metabolic process AT4G14850
GO:0031425
ISO
PLAZA Integrative Orthologychloroplast RNA processing AT2G29760
GO:0010305
ISO
PLAZA Integrative Orthologyleaf vascular tissue pattern formation AT4G18750
GO:0010588
ISO
PLAZA Integrative Orthologycotyledon vascular tissue pattern formation AT4G18750
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G08490
GO:1900865
ISO
PLAZA Integrative Orthologychloroplast RNA modification AT4G18520
GO:0000963
ISO
PLAZA Integrative Orthologymitochondrial RNA processing AT2G46050
GO:0016556
ISO
PLAZA Integrative OrthologymRNA modification AT1G11290
GO:0016554
ISO
PLAZA Integrative Orthologycytidine to uridine editing AT3G02330
GO:0019288
ISO
PLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway AT4G14850
GO:0050790
ISO
PLAZA Integrative Orthologyregulation of catalytic activity AT4G14850
GO:0019287
ISO
PLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process, mevalonate pathway AT4G14850
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT4G18750
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT4G14850
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G08490
GO:0080156
ISO
PLAZA Integrative Orthologymitochondrial mRNA modification AT2G46050
GO:0009451
ISO
PLAZA Integrative OrthologyRNA modification AT5G09950
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G49170
GO:0010087
ISO
PLAZA Integrative Orthologyphloem or xylem histogenesis AT4G18750
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT4G18520

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G18520
GO:0034046
ISO
PLAZA Integrative Orthologypoly(G) binding AT4G14850
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0004519
ISO
PLAZA Integrative Orthologyendonuclease activity AT1G11290
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G26782
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G19720
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G19720
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G18520

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032867 DYW domain
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
35.1 not assigned.annotated