Gene: Pp3c5_13580

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c5_13580
  • Transcript Identifier Pp3c5_13580V3.2
  • Gene Type Coding gene
  • Location Chr05 : 9752729-9755539 : positive

Gene Family Information

  • ID HOM05D006028
  • #Genes/#Species 131/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c5_13580V3.2
  • pacid 32953766
  • alias Phpat.005G051500
  • alias Phypa_171522
  • alias Pp1s297_4V6
  • uniprot A9TRE7

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002098
IEA
GOA DatabasetRNA wobble uridine modification
GO:0002098
IEA
InterProtRNA wobble uridine modification
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0006400
IBA
GOA DatabasetRNA modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000049
IBA
GOA DatabasetRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033588
IBA
IEA
GOA Databaseelongator holoenzyme complex
GO:0033588
IEA
InterProelongator holoenzyme complex
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005829
IBA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019519 Elongator complex protein 5
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
15.3.5.2.5 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.ELONGATOR transcription elongation complex.component ELP5