Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 1.2e-211 739.6 379 100.0
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 7.4e-84 315.1 381 47.8
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 1.0e-72 278.1 392 43.6
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 3.8e-72 276.2 391 43.2
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 1.9e-71 273.9 391 42.7
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 2.5e-71 273.5 392 43.4
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 1.2e-70 271.2 392 43.9
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 4.7e-70 269.2 392 43.1
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 4.7e-70 269.2 391 42.7
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 8.0e-70 268.5 394 42.6
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 3.0e-69 266.5 394 43.1
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 5.2e-69 265.8 388 43.8
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 1.2e-68 264.6 390 42.3
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 1.5e-68 264.2 394 42.4
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 2.0e-68 263.8 390 41.0
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 5.7e-68 262.3 389 40.6
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 7.5e-68 261.9 392 41.6
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 9.8e-68 261.5 390 42.1
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 9.8e-68 261.5 391 40.4
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 1.3e-67 261.2 391 41.2
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 2.8e-67 260.0 390 41.8
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 3.7e-67 259.6 388 39.9
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 3.7e-67 259.6 382 44.0
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 8.3e-67 258.5 399 42.1
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 1.1e-66 258.1 391 41.2
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 1.4e-66 257.7 389 40.4
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 1.8e-66 257.3 391 41.9
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 2.4e-66 256.9 381 39.6
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 2.4e-66 256.9 390 41.0
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 3.1e-66 256.5 404 40.3
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 3.1e-66 256.5 389 40.9
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 5.4e-66 255.8 396 40.2
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 9.1e-66 255.0 387 41.1
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 1.2e-65 254.6 391 40.2
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 2.0e-65 253.8 390 39.2
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 2.0e-65 253.8 390 41.0
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 2.7e-65 253.4 388 41.8
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 4.5e-65 252.7 391 41.7
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 4.5e-65 252.7 391 41.2
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 7.7e-65 251.9 397 42.3
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 1.0e-64 251.5 390 41.8
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 5.0e-64 249.2 387 40.3
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 5.0e-64 249.2 392 40.3
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 8.6e-64 248.4 384 40.4
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 8.6e-64 248.4 391 41.2
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 1.1e-63 248.1 397 39.5
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 1.5e-63 247.7 392 41.1
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 2.5e-63 246.9 391 40.2
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 3.3e-63 246.5 392 39.5
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 4.2e-63 246.1 406 40.9
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 4.2e-63 246.1 411 39.7
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 4.2e-63 246.1 391 40.4
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 7.2e-63 245.4 387 40.1
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 7.2e-63 245.4 391 41.2
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.8e-62 243.4 391 39.9
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 2.8e-62 243.4 384 40.1
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 3.6e-62 243.0 392 39.8
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 4.7e-62 242.7 390 39.5
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 4.7e-62 242.7 392 40.3
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 1.0e-61 241.5 392 40.1
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 1.8e-61 240.7 396 41.2
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 1.5e-60 237.7 388 41.0
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.5e-60 237.7 392 39.8
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.0e-60 237.3 392 39.8
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 3.4e-60 236.5 393 41.2
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 3.4e-60 236.5 390 39.2
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 5.7e-60 235.7 394 40.1
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 9.8e-60 235.0 390 37.9
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 1.7e-59 234.2 389 39.1
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 1.7e-59 234.2 390 38.5
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 1.7e-59 234.2 390 38.5
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 3.7e-59 233.0 391 38.9
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 4.9e-59 232.6 390 38.5
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 1.1e-58 231.5 395 39.2
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 2.4e-58 230.3 388 39.9
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 3.1e-58 229.9 395 39.2
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 4.1e-58 229.6 394 38.6
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 5.4e-58 229.2 396 38.4
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 9.2e-58 228.4 387 39.8
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 9.2e-58 228.4 398 38.7
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 1.2e-57 228.0 396 40.2
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 1.6e-57 227.6 416 38.5
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 4.5e-57 226.1 390 38.2
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 1.3e-56 224.6 392 37.5
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 1.3e-56 224.6 393 38.2
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 2.3e-56 223.8 382 37.7
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 6.6e-56 222.2 386 39.4
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 4.7e-54 216.1 364 39.6
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 1.0e-53 214.9 381 41.2
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 3.0e-53 213.4 389 37.3
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 4.0e-53 213.0 394 38.6
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 5.2e-53 212.6 392 38.5
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 2.6e-52 210.3 390 37.4
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 3.7e-51 206.5 342 36.8
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 4.6e-49 199.5 393 36.6
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 3.0e-48 196.8 236 47.5
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 5.6e-47 192.6 294 41.2
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 8.6e-40 168.7 320 38.4
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 1.6e-38 164.5 261 39.8
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 1.8e-37 161.0 236 44.5
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 2.3e-32 144.1 201 40.8
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 3.9e-32 143.3 259 35.5
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 2.2e-27 127.5 148 52.0
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 2.4e-26 124.0 151 48.3
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 3.2e-26 123.6 153 49.0
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 4.6e-25 119.8 152 48.7
AagrBONN_evm.TU.Sc2ySwM_368.1687 Anthoceros agrestis HOM05D006028 ORTHO05D007784 1.0e-24 118.6 164 40.9
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 3.9e-24 116.7 383 30.0
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 3.1e-21 107.1 186 34.9
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 5.6e-15 86.3 161 34.8
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 1.3e-14 85.1 278 27.3
CBR_g37698 Chara braunii HOM05D006028 ORTHO05D007784 9.9e-12 75.5 444 24.1
SEGI_36511 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 8.4e-11 72.4 71 50.7
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 1.3e-08 65.1 163 30.1
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.5e-07 61.6 171 32.2
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 9.6e-07 58.9 171 31.6
FAN17G0046 Fragaria x ananassa HOM05D006028 ORTHO05D007784 1.3e-06 58.5 68 42.6


User provided reference genes

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