Gene: Pp3c4_13300

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c4_13300
  • Transcript Identifier Pp3c4_13300V3.1
  • Gene Type Coding gene
  • Location Chr04 : 9317493-9322665 : positive

Gene Family Information

  • ID HOM05D000561
  • #Genes/#Species 984/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c4_13300V3.1
  • pacid 32921714
  • alias Pp1s339_11V6
  • alias Phpat.004G048000
  • alias Phypa_2573
  • uniprot A0A2K1KNA4

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034063
ISO
PLAZA Integrative Orthologystress granule assembly AT3G19130
GO:0010193
ISO
PLAZA Integrative Orthologyresponse to ozone AT1G11650
GO:0051028
ISO
PLAZA Integrative OrthologymRNA transport Os04g0625800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003729
IBA
GOA DatabasemRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G19130

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IBA
GOA Databasecytosol
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os04g0625800
GO:0010494
ISO
PLAZA Integrative Orthologycytoplasmic stress granule AT3G19130
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os04g0625800

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.8.4 RNA processing.mRNA sequestration.mRNA-binding regulatory factor (RBP45/47)