Gene: Pp3c3_6830
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c3_6830
- Transcript Identifier Pp3c3_6830V3.2
- Gene Type Coding gene
- Location Chr03 : 4570988-4571665 : positive
Gene Family Information
- ID HOM05D000078
- #Genes/#Species 3763/97
- Phylogenetic origin
- ID ORTHO05D000025
- #Genes/#Species 3714/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c3_6830V3.2
- pacid 32944439
- alias Pp1s296_32V6
- alias Phpat.003G026400
- alias Phypa_8600
- uniprot A0A2K1KTK0
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009861 | ISO | PLAZA Integrative Orthology | jasmonic acid and ethylene-dependent systemic resistance | AT1G44830 |
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT1G12610 |
| GO:0034605 | ISO | PLAZA Integrative Orthology | cellular response to heat | AT1G21910 |
| GO:0071497 | ISO | PLAZA Integrative Orthology | cellular response to freezing | AT1G21910 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT4G36900 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT1G46768 |
| GO:0019760 | ISO | PLAZA Integrative Orthology | glucosinolate metabolic process | AT1G12630 |
| GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | AT5G52020 |
| GO:0010371 | ISO | PLAZA Integrative Orthology | regulation of gibberellin biosynthetic process | AT1G12610 |
| GO:0009863 | ISO | PLAZA Integrative Orthology | salicylic acid mediated signaling pathway | AT1G44830 |
| GO:0009620 | ISO | PLAZA Integrative Orthology | response to fungus | AT1G22810 |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT1G46768 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT3G50260 |
| GO:0051510 | ISO | PLAZA Integrative Orthology | regulation of unidimensional cell growth | AT1G12610 |
| GO:0009617 | ISO | PLAZA Integrative Orthology | response to bacterium | AT3G50260 |
| GO:0048510 | ISO | PLAZA Integrative Orthology | regulation of timing of transition from vegetative to reproductive phase | AT1G12610 |
| GO:0045088 | ISO | PLAZA Integrative Orthology | regulation of innate immune response | AT1G44830 |
| GO:0010941 | ISO | PLAZA Integrative Orthology | regulation of cell death | AT3G50260 |
| GO:0050826 | ISO | PLAZA Integrative Orthology | response to freezing | AT1G12610 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT1G71520 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT1G74930 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:1900030 | ISO | PLAZA Integrative Orthology | regulation of pectin biosynthetic process | AT1G44830 |
| GO:0010087 | ISO | PLAZA Integrative Orthology | phloem or xylem histogenesis | AT1G74930 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT1G12610 |
| GO:0009753 | ISO | PLAZA Integrative Orthology | response to jasmonic acid | AT1G21910 |
| GO:1900057 | ISO | PLAZA Integrative Orthology | positive regulation of leaf senescence | AT4G36900 |
| GO:0009751 | ISO | PLAZA Integrative Orthology | response to salicylic acid | AT1G21910 |
| GO:0042631 | ISO | PLAZA Integrative Orthology | cellular response to water deprivation | AT1G22810 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc02g093130.3 |
| GO:0002213 | ISO | PLAZA Integrative Orthology | defense response to insect | AT1G74930 |
| GO:0051301 | ISO | PLAZA Integrative Orthology | cell division | AT1G74930 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G12630 |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT1G12610 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G22810 |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.7.2 | RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (DREB) |