Gene: AT5G52020

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G52020
  • Transcript Identifier AT5G52020.1
  • Gene Type Coding gene
  • Location Chr5 : 21124192-21124890 : negative

Gene Family Information

  • ID HOM05D000078
  • #Genes/#Species 3763/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G52020.1
  • uniprot Q9FJ90

Descriptions

  • Description Integrase-type DNA-binding superfamily protein
  • Computational description Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: defense response to fungus; LOCATED IN: chloroplast; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G12630.1); Has 5783 Blast hits to 5605 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5767; Viruses - 2; Other Eukaryotes - 14 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
Gene Ontologyregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0050832
IEP
Gene Ontologydefense response to fungus1
GO:0019760
IMP
Gene Ontologyglucosinolate metabolic process2
GO:0009873
IEA
GOA Databaseethylene-activated signaling pathway

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity3
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding4
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016177 DNA-binding domain superfamily
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
Mapman id Description
15.5.7.2 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (DREB)