Gene: Pp3c2_9460

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c2_9460
  • Transcript Identifier Pp3c2_9460V3.2
  • Gene Type Coding gene
  • Location Chr02 : 6571392-6573557 : positive

Gene Family Information

  • ID HOM05D000131
  • #Genes/#Species 2694/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c2_9460V3.2
  • pacid 32937055
  • alias Phpat.002G040500
  • alias Pp1s84_82V6
  • alias Phypa_212895
  • uniprot A9SJ59

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045490
IEA
GOA Databasepectin catabolic process
GO:0042547
ISO
PLAZA Integrative Orthologycell wall modification involved in multidimensional cell growth AT3G54920
GO:0098542
ISO
PLAZA Integrative Orthologydefense response to other organism AT3G54920
GO:0009664
ISO
PLAZA Integrative Orthologyplant-type cell wall organization AT1G14420
GO:0009624
ISO
PLAZA Integrative Orthologyresponse to nematode AT4G24780

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030570
IEA
GOA Databasepectate lyase activity
GO:0030570
IEA
InterPropectate lyase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016829
IEA
GOA Databaselyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031225
ISO
PLAZA Integrative Orthologyanchored component of membrane AT5G04310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002022 Pectate lyase
IPR018082 AmbAllergen
IPR012334 Pectin lyase fold
IPR011050 Pectin lyase fold/virulence factor
IPR045032 Pectin lyase family
Mapman id Description
21.3.5.2 Cell wall organisation.pectin.modification and degradation.pectate lyase