Gene: Pp3c2_9140

General Information

Structural Information

Species Physcomitrium patens
Gene Identifier Pp3c2_9140
Transcript Identifier Pp3c2_9140V3.1
Gene Type Coding gene
Location Chr02 : 6353940-6359207 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001722
#Genes/#Species 376/95
Phylogenetic origin

ID ORTHO05D001910
#Genes/#Species 338/95
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

name Pp3c2_9140V3.1
pacid 32935789
alias Phypa_13586
alias Pp1s84_50V6
alias Phpat.002G039000
uniprot A0A2K1L0S1

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0034063	ISO	PLAZA Integrative Orthology	stress granule assembly	AT3G14100
GO:0071456	ISO	PLAZA Integrative Orthology	cellular response to hypoxia	AT3G14100

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0003723	IEA	GOA Database	RNA binding
GO:0003729	IBA	GOA Database	mRNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G54080

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G14100
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT3G14100

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR035979	RNA-binding domain superfamily
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR000504	RNA recognition motif domain

Mapman id	Description
16.8.3	RNA processing.mRNA sequestration.mRNA-binding regulatory factor (UBP1)