Gene: Pp3c2_12230

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c2_12230
  • Transcript Identifier Pp3c2_12230V3.2
  • Gene Type Coding gene
  • Location Chr02 : 8188442-8192766 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c2_12230V3.2
  • pacid 32937312
  • alias Phypa_192620
  • alias Pp1s183_52V6
  • alias Phpat.002G053000
  • uniprot A0A2K1L181

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0140547
ISO
PLAZA Integrative Orthologyacquisition of seed longevity AT4G02750
GO:0016554
ISO
PLAZA Integrative Orthologycytidine to uridine editing AT3G02330
GO:0016556
ISO
PLAZA Integrative OrthologymRNA modification AT5G55740
GO:0009644
ISO
PLAZA Integrative Orthologyresponse to high light intensity AT3G22690
GO:0000963
ISO
PLAZA Integrative Orthologymitochondrial RNA processing AT2G46050
GO:1900865
ISO
PLAZA Integrative Orthologychloroplast RNA modification AT4G18520
GO:1900864
ISO
PLAZA Integrative Orthologymitochondrial RNA modification AT3G13880
GO:0031426
ISO
PLAZA Integrative Orthologypolycistronic mRNA processing AT3G46790
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G08490
GO:0010207
ISO
PLAZA Integrative Orthologyphotosystem II assembly AT3G22690
GO:0010027
ISO
PLAZA Integrative Orthologythylakoid membrane organization AT3G22690
GO:0010588
ISO
PLAZA Integrative Orthologycotyledon vascular tissue pattern formation AT4G18750
GO:0010305
ISO
PLAZA Integrative Orthologyleaf vascular tissue pattern formation AT4G18750
GO:0031425
ISO
PLAZA Integrative Orthologychloroplast RNA processing AT2G02980
GO:0010102
ISO
PLAZA Integrative Orthologylateral root morphogenesis AT2G33680
GO:0010214
ISO
PLAZA Integrative Orthologyseed coat development AT4G02750
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT4G18750
GO:0048564
ISO
PLAZA Integrative Orthologyphotosystem I assembly AT3G22690
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G22690
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G08490
GO:0080156
ISO
PLAZA Integrative Orthologymitochondrial mRNA modification AT2G46050
GO:0010380
ISO
PLAZA Integrative Orthologyregulation of chlorophyll biosynthetic process AT3G22690
GO:0009451
ISO
PLAZA Integrative OrthologyRNA modification AT3G22690
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G49170
GO:0010087
ISO
PLAZA Integrative Orthologyphloem or xylem histogenesis AT4G18750
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT4G18520

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G55740
GO:0005515
IEA
InterProprotein binding
GO:0004519
ISO
PLAZA Integrative Orthologyendonuclease activity AT1G11290
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G26782
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G02980

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR032867 DYW domain
Mapman id Description
35.1 not assigned.annotated