Gene: Pp3c27_6210
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c27_6210
- Transcript Identifier Pp3c27_6210V3.2
- Gene Type Coding gene
- Location Chr27 : 3564946-3588356 : negative
Gene Family Information
- ID HOM05D005521
- #Genes/#Species 139/9
- Phylogenetic origin
- ID ORTHO05D008962
- #Genes/#Species 112/9
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c27_6210V3.2
- pacid 32952094
- alias Pp1s214_25V6
- alias Phpat.027G026000
- uniprot A0A2K1IAX3
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030030 | IEA | GOA Database | cell projection organization | |
| GO:0044458 | ISO | PLAZA Integrative Orthology | motile cilium assembly | Cre09.g392282 |
| GO:0072594 | ISO | PLAZA Integrative Orthology | establishment of protein localization to organelle | Cre09.g392282 |
| GO:0007018 | IEA | GOA Database | microtubule-based movement | |
| GO:0007018 | IEA | InterPro | microtubule-based movement |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003774 | ISO | PLAZA Integrative Orthology | motor activity | Cre09.g392282 |
| GO:0045503 | ISO | PLAZA Integrative Orthology | dynein light chain binding | Cre09.g392282 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | Cre09.g392282 |
| GO:0008569 | IEA | GOA Database | minus-end-directed microtubule motor activity | |
| GO:0008569 | IEA | InterPro | minus-end-directed microtubule motor activity | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030990 | ISO | PLAZA Integrative Orthology | intraciliary transport particle | Cre09.g392282 |
| GO:0036064 | ISO | PLAZA Integrative Orthology | ciliary basal body | Cre09.g392282 |
| GO:0097014 | ISO | PLAZA Integrative Orthology | ciliary plasm | Cre09.g392282 |
| GO:0005868 | ISO | PLAZA Integrative Orthology | cytoplasmic dynein complex | Cre09.g392282 |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0042995 | IEA | GOA Database | cell projection | |
| GO:0005929 | IEA | GOA Database | cilium | |
| GO:0005874 | IEA | GOA Database | microtubule | |
| GO:0005856 | IEA | GOA Database | cytoskeleton | |
| GO:0030286 | IEA | GOA Database | dynein complex | |
| GO:0030286 | IEA | InterPro | dynein complex | |
| GO:0031514 | IEA | GOA Database | motile cilium |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR035706 | Dynein heavy chain, ATP-binding dynein motor region |
| IPR013602 | Dynein heavy chain, linker |
| IPR042219 | Dynein heavy chain AAA lid domain superfamily |
| IPR041658 | Dynein heavy chain AAA lid domain |
| IPR024317 | Dynein heavy chain, AAA module D4 |
| IPR042222 | Dynein heavy chain, domain 2, N-terminal |
| IPR041228 | Dynein heavy chain, C-terminal domain |
| IPR043157 | Dynein heavy chain, AAA1 domain, small subdomain |
| IPR035699 | Dynein heavy chain, hydrolytic ATP-binding dynein motor region |
| IPR043160 | Dynein heavy chain, C-terminal domain, barrel region |
| IPR024743 | Dynein heavy chain, coiled coil stalk |
| IPR041589 | Dynein heavy chain 3, AAA+ lid domain |
| IPR004273 | Dynein heavy chain region D6 P-loop domain |
| IPR042228 | Dynein heavy chain, linker, subdomain 3 |
| IPR041466 | Dynein heavy chain, AAA 5 extension domain |
| Mapman id | Description |
|---|---|
| 20.1.4.1 | Cytoskeleton organisation.microtubular network.Dynein microtubule-based motor protein complex.heavy chain |