Gene: Pp3c27_2170
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c27_2170
- Transcript Identifier Pp3c27_2170V3.1
- Gene Type Coding gene
- Location Chr27 : 1239324-1242089 : negative
Gene Family Information
- ID HOM05D004135
- #Genes/#Species 171/96
- Phylogenetic origin
- ID ORTHO05D005558
- #Genes/#Species 155/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c27_2170V3.1
- pacid 32952272
- alias Pp1s54_149V6
- alias Phypa_209440
- alias Phpat.027G008000
- uniprot A9S7L5
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006888 | IBA | GOA Database | endoplasmic reticulum to Golgi vesicle-mediated transport | |
| GO:0006891 | IBA | GOA Database | intra-Golgi vesicle-mediated transport | |
| GO:0016192 | IEA | GOA Database | vesicle-mediated transport | |
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0006890 | IEA | GOA Database | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | |
| GO:0006890 | IEA | InterPro | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005198 | IEA | GOA Database | structural molecule activity | |
| GO:0005198 | IEA | InterPro | structural molecule activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT1G30630 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G34840 |
| GO:0030126 | IBA | GOA Database | COPI vesicle coat | |
| GO:0031410 | IEA | GOA Database | cytoplasmic vesicle | |
| GO:0005794 | IEA | GOA Database | Golgi apparatus | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0000139 | IEA | GOA Database | Golgi membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.2.1.1.3 | Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.subunit epsilon |