Gene: Pp3c25_4810

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c25_4810
  • Transcript Identifier Pp3c25_4810V3.1
  • Gene Type Coding gene
  • Location Chr25 : 3108537-3110294 : positive

Gene Family Information

  • ID HOM05D000433
  • #Genes/#Species 1194/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c25_4810V3.1
  • pacid 32980181
  • uniprot A0A2K1IDS4

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1901812
ISO
PLAZA Integrative Orthologybeta-carotene biosynthetic process Solyc07g056570.1
GO:0010114
ISO
PLAZA Integrative Orthologyresponse to red light AT3G24220
GO:1901177
ISO
PLAZA Integrative Orthologylycopene biosynthetic process Solyc07g056570.1
GO:0009688
ISO
PLAZA Integrative Orthologyabscisic acid biosynthetic process Solyc07g056570.1
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT3G14440
GO:1901811
ISO
PLAZA Integrative Orthologybeta-carotene catabolic process AT4G19170
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin Solyc07g056570.1
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin Solyc07g056570.1
GO:0009639
ISO
PLAZA Integrative Orthologyresponse to red or far red light AT3G24220
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid Solyc08g016720.1
GO:0048653
ISO
PLAZA Integrative Orthologyanther development Solyc07g056570.1
GO:0016123
ISO
PLAZA Integrative Orthologyxanthophyll biosynthetic process Solyc07g056570.1
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress Solyc07g056570.1
GO:0016121
IBA
GOA Databasecarotene catabolic process
GO:0010162
ISO
PLAZA Integrative Orthologyseed dormancy process AT1G30100
GO:0042538
ISO
PLAZA Integrative Orthologyhyperosmotic salinity response AT3G14440
GO:0009555
ISO
PLAZA Integrative Orthologypollen development Solyc07g056570.1
GO:0043289
ISO
PLAZA Integrative Orthologyapocarotenoid biosynthetic process Solyc07g056570.1
GO:0009751
ISO
PLAZA Integrative Orthologyresponse to salicylic acid Solyc07g056570.1
GO:0009835
ISO
PLAZA Integrative Orthologyfruit ripening Solyc07g056570.1
GO:0009856
ISO
PLAZA Integrative Orthologypollination Solyc07g056570.1
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc08g016720.1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G19170
GO:0051213
IEA
GOA Databasedioxygenase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016702
IEA
GOA Databaseoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0016702
IEA
InterProoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0010436
IBA
GOA Databasecarotenoid dioxygenase activity
GO:0045549
ISO
PLAZA Integrative Orthology9-cis-epoxycarotenoid dioxygenase activity AT3G24220

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT3G24220
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT1G30100
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G19170
GO:0010287
ISO
PLAZA Integrative Orthologyplastoglobule AT4G19170
GO:0009570
IBA
GOA Databasechloroplast stroma

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004294 Carotenoid oxygenase
Mapman id Description
11.1.1.4 Phytohormone action.abscisic acid.biosynthesis.neoxanthin cleavage protein
9.1.6.3.2 Secondary metabolism.terpenoids.carotenoid biosynthesis.apocarotenoids.class-CCD4 carotenoid cleavage dioxygenase