Gene: Solyc08g016720.1
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc08g016720.1
- Transcript Identifier Solyc08g016720.1.1
- Gene Type Coding gene
- Location SL4.0ch08 : 8664604-8666349 : positive
Gene Family Information
- ID HOM05D000433
- #Genes/#Species 1194/98
- Phylogenetic origin
- ID ORTHO05D000443
- #Genes/#Species 921/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc08g016720.1.1
- uniprot K4CJJ1
- gene_id Solyc08g016720
Descriptions
- Description 9-cis-epoxycarotenoid dioxygenase2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010162 | ISO | PLAZA Integrative Orthology | seed dormancy process | AT1G30100 |
| GO:0016121 | IBA | GOA Database | carotene catabolic process | |
| GO:0009737 | IEP | GOA Database | response to abscisic acid | |
| GO:0009414 | IEP | GOA Database | response to water deprivation | |
| GO:0009688 | IEA | GOA Database | abscisic acid biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016702 | IEA | GOA Database | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | |
| GO:0016702 | IEA | InterPro | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | |
| GO:0010436 | IBA | GOA Database | carotenoid dioxygenase activity | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0051213 | IEA | GOA Database | dioxygenase activity | |
| GO:0045549 | IEA | GOA Database | 9-cis-epoxycarotenoid dioxygenase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | AT1G30100 |
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | AT4G18350 |
| GO:0009570 | IBA IEA | GOA Database | chloroplast stroma | |
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009536 | IEA | GOA Database | plastid |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004294 | Carotenoid oxygenase |
| Mapman id | Description |
|---|---|
| 11.1.1.4 | Phytohormone action.abscisic acid.biosynthesis.neoxanthin cleavage protein |