Gene: Pp3c25_14180

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c25_14180
  • Transcript Identifier Pp3c25_14180V3.3
  • Gene Type Coding gene
  • Location Chr25 : 10246569-10247502 : positive

Gene Family Information

  • ID HOM05D000218
  • #Genes/#Species 1867/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c25_14180V3.3
  • pacid 32980712
  • alias Phpat.025G047100
  • alias Phypa_216423
  • alias Pp1s129_28V6
  • uniprot A9SWJ1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045116
IBA
GOA Databaseprotein neddylation
GO:0016567
IBA
GOA Databaseprotein ubiquitination
GO:0019941
IBA
GOA Databasemodification-dependent protein catabolic process
GO:0030162
IBA
GOA Databaseregulation of proteolysis
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G31340
GO:0009693
ISO
PLAZA Integrative Orthologyethylene biosynthetic process AT1G31340
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G31340

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0031625
IBA
GOA Databaseubiquitin protein ligase binding
GO:0031386
IBA
GOA Databaseprotein tag
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G31340

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005634
IBA
GOA Databasenucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G31340
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G31340
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT2G35635

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029071 Ubiquitin-like domain superfamily
IPR038738 Nedd8-like ubiquitin
IPR000626 Ubiquitin-like domain
IPR019956 Ubiquitin domain
Mapman id Description
19.2.2.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.RUB/NEDD8 conjugation (neddylation).ubiquitin-fold protein (RUB)