Gene: Pp3c24_9790
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c24_9790
- Transcript Identifier Pp3c24_9790V3.1
- Gene Type Coding gene
- Location Chr24 : 6738077-6738782 : positive
Gene Family Information
- ID HOM05D001645
- #Genes/#Species 393/100
- Phylogenetic origin
- ID ORTHO05D001749
- #Genes/#Species 360/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c24_9790V3.1
- pacid 32909782
- alias Pp1s196_84V6
- alias Phpat.024G034300
- uniprot A0A2K1IG66
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | ISO | PLAZA Homology (enrichment) | translation | HOM05D001645 |
| GO:0045903 | IBA | GOA Database | positive regulation of translational fidelity |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G39850 |
| GO:0003723 | ISO | PLAZA Homology (enrichment) | RNA binding | HOM05D001645 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G39850 |
| GO:0019843 | IBA | GOA Database | rRNA binding | |
| GO:0003735 | IBA | GOA Database | structural constituent of ribosome |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G39850 |
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT5G15200 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT5G15200 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G15200 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G39850 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT5G15200 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT5G15200 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G15200 |
| GO:0015935 | IBA | GOA Database | small ribosomal subunit | |
| GO:0022627 | IBA | GOA Database | cytosolic small ribosomal subunit | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR022801 | Ribosomal protein S4/S9 |
| Mapman id | Description |
|---|---|
| 35.2 | not assigned.not annotate |