Gene: Pp3c21_9740

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c21_9740
  • Transcript Identifier Pp3c21_9740V3.2
  • Gene Type Coding gene
  • Location Chr21 : 6396379-6397001 : positive

Gene Family Information

  • ID HOM05D003494
  • #Genes/#Species 195/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c21_9740V3.2
  • pacid 32915985
  • alias Phpat.021G033900
  • uniprot A9U3P9

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000387
IEA
GOA Databasespliceosomal snRNP assembly
GO:0000387
IEA
InterProspliceosomal snRNP assembly
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G23930

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
GOA Databasespliceosomal complex
GO:0005681
IEA
InterProspliceosomal complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G23930
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G11500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044641 Sm-like protein Lsm7/SmG
IPR010920 LSM domain superfamily
IPR001163 LSM domain, eukaryotic/archaea-type
IPR034098 Small nuclear ribonucleoprotein G
Mapman id Description
16.2.2.7 RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-G