Gene: Pp3c21_16990
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c21_16990
- Transcript Identifier Pp3c21_16990V3.4
- Gene Type Coding gene
- Location Chr21 : 10738809-10740717 : positive
Gene Family Information
- ID HOM05D000131
- #Genes/#Species 2694/97
- Phylogenetic origin
- ID ORTHO05D000086
- #Genes/#Species 2333/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c21_16990V3.4
- pacid 32916629
- alias Phpat.021G060800
- alias Pp1s563_1V6
- alias Phypa_62027
- uniprot A0A2K1ISB5
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045490 | IEA | GOA Database | pectin catabolic process | |
| GO:0042547 | ISO | PLAZA Integrative Orthology | cell wall modification involved in multidimensional cell growth | AT3G54920 |
| GO:0098542 | ISO | PLAZA Integrative Orthology | defense response to other organism | AT3G54920 |
| GO:0009664 | ISO | PLAZA Integrative Orthology | plant-type cell wall organization | AT1G14420 |
| GO:0009624 | ISO | PLAZA Integrative Orthology | response to nematode | AT4G24780 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030570 | IEA | GOA Database | pectate lyase activity | |
| GO:0030570 | IEA | InterPro | pectate lyase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0016829 | IEA | GOA Database | lyase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031225 | ISO | PLAZA Integrative Orthology | anchored component of membrane | AT5G04310 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.3.5.2 | Cell wall organisation.pectin.modification and degradation.pectate lyase |