Gene: Pp3c20_19020

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c20_19020
  • Transcript Identifier Pp3c20_19020V3.1
  • Gene Type Coding gene
  • Location Chr20 : 12367317-12373544 : positive

Gene Family Information

  • ID HOM05D001529
  • #Genes/#Species 415/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c20_19020V3.1
  • pacid 32945714
  • alias Phpat.020G070600
  • alias Pp1s400_36V6
  • alias Phypa_227167
  • uniprot A9U0D5

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006435
IBA
IEA
GOA Databasethreonyl-tRNA aminoacylation
GO:0006435
IEA
InterProthreonyl-tRNA aminoacylation
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0043039
IEA
GOA DatabasetRNA aminoacylation
GO:0043039
IEA
InterProtRNA aminoacylation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0004829
IBA
IEA
GOA Databasethreonine-tRNA ligase activity
GO:0004829
IEA
InterProthreonine-tRNA ligase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0016874
IEA
GOA Databaseligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G26830
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G26830
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G26830
GO:0009507
IBA
GOA Databasechloroplast
GO:0005739
IBA
IEA
GOA Databasemitochondrion
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002320 Threonine-tRNA ligase, class IIa
IPR004095 TGS
IPR012947 Threonyl/alanyl tRNA synthetase, SAD
IPR036621 Anticodon-binding domain superfamily
IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily
IPR033728 Threonine-tRNA ligase catalytic core domain
IPR004154 Anticodon-binding
IPR012676 TGS-like
IPR012675 Beta-grasp domain superfamily
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
Mapman id Description
17.2.19 Protein biosynthesis.aminoacyl-tRNA synthetase activities.threonine-tRNA ligase