Gene: Pp3c1_24020

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c1_24020
  • Transcript Identifier Pp3c1_24020V3.1
  • Gene Type Coding gene
  • Location Chr01 : 17713391-17716460 : positive

Gene Family Information

  • ID HOM05D000226
  • #Genes/#Species 1818/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c1_24020V3.1
  • pacid 32968861
  • alias Phpat.001G095200
  • alias Pp1s59_146V6
  • uniprot A0A2K1L9I5

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010091
ISO
PLAZA Integrative Orthologytrichome branching AT1G73360
GO:0010090
ISO
PLAZA Integrative Orthologytrichome morphogenesis AT1G05230
GO:0048765
ISO
PLAZA Integrative Orthologyroot hair cell differentiation AT4G00730
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT4G04890
GO:0048825
ISO
PLAZA Integrative Orthologycotyledon development AT4G04890
GO:0006349
ISO
PLAZA Integrative Orthologyregulation of gene expression by genetic imprinting AT4G25530
GO:0006723
ISO
PLAZA Integrative Orthologycuticle hydrocarbon biosynthetic process AT4G00730
GO:2000033
ISO
PLAZA Integrative Orthologyregulation of seed dormancy process AT4G04890
GO:0009913
ISO
PLAZA Integrative Orthologyepidermal cell differentiation AT4G04890
GO:0009957
ISO
PLAZA Integrative Orthologyepidermal cell fate specification AT1G79840
GO:0043481
ISO
PLAZA Integrative Orthologyanthocyanin accumulation in tissues in response to UV light AT4G00730
GO:0048497
ISO
PLAZA Integrative Orthologymaintenance of floral organ identity AT3G61150
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA AT4G25530
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT4G04890
GO:0090627
ISO
PLAZA Integrative Orthologyplant epidermal cell differentiation AT4G21750
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0010062
ISO
PLAZA Integrative Orthologynegative regulation of trichoblast fate specification AT1G79840
GO:0009911
ISO
PLAZA Integrative Orthologypositive regulation of flower development AT4G25530
GO:0009828
ISO
PLAZA Integrative Orthologyplant-type cell wall loosening AT1G73360
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT4G00730
GO:0009827
ISO
PLAZA Integrative Orthologyplant-type cell wall modification AT4G00730
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT4G25530

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G73360
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT4G25530
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G73360
GO:0008289
IEA
GOA Databaselipid binding
GO:0008289
IEA
InterProlipid binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000981
IEA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT4G21750
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT1G73360

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001356 Homeobox domain
IPR002913 START domain
IPR009057 Homeobox-like domain superfamily
IPR042160 Homeobox-leucine zipper protein GLABRA2/ANL2/PDF2/ATML1-like
IPR023393 START-like domain superfamily
Mapman id Description
15.5.3.3 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP IV)