Gene: Pp3c1_24000
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c1_24000
- Transcript Identifier Pp3c1_24000V3.1
- Gene Type Coding gene
- Location Chr01 : 17698853-17705680 : positive
Gene Family Information
- ID HOM05D002031
- #Genes/#Species 326/98
- Phylogenetic origin
- ID ORTHO05D002143
- #Genes/#Species 313/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c1_24000V3.1
- pacid 32968555
- alias Phpat.001G095100
- alias Pp1s59_148V6
- alias Phypa_182684
- uniprot A0A2K1L9I7
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006413 | IEA | GOA Database | translational initiation | |
| GO:0006413 | IEA | InterPro | translational initiation | |
| GO:0006412 | IEA | GOA Database | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005525 | IEA | GOA Database | GTP binding | |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0003743 | IEA | GOA Database | translation initiation factor activity | |
| GO:0003743 | IEA | InterPro | translation initiation factor activity | |
| GO:0003924 | IEA | GOA Database | GTPase activity | |
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G17220 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT1G17220 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G17220 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT1G17220 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR023115 | Translation initiation factor IF- 2, domain 3 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR009000 | Translation protein, beta-barrel domain superfamily |
| IPR036925 | Translation initiation factor IF-2, domain 3 superfamily |
| IPR005225 | Small GTP-binding protein domain |
| IPR015760 | Translation initiation factor IF- 2 |
| IPR044145 | Translation initiation factor IF-2, domain II |
| IPR006847 | Translation initiation factor IF-2, N-terminal |
| IPR000178 | Translation initiation factor aIF-2, bacterial-like |
| IPR000795 | Translational (tr)-type GTP-binding domain |
| Mapman id | Description |
|---|---|
| 17.7.3.3 | Protein biosynthesis.organelle machinery.translation initiation.initiation factor (IF-2) |