Gene: Pp3c1_10010
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c1_10010
- Transcript Identifier Pp3c1_10010V3.1
- Gene Type Coding gene
- Location Chr01 : 7239628-7244628 : negative
Gene Family Information
- ID HOM05D005082
- #Genes/#Species 147/95
- Phylogenetic origin
- ID ORTHO05D006474
- #Genes/#Species 142/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c1_10010V3.1
- pacid 32971536
- alias Phpat.001G040800
- alias Pp1s139_3V6
- alias Phypa_137714
- uniprot A0A2K1L7N5
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043039 | IEA | GOA Database | tRNA aminoacylation | |
| GO:0043039 | IEA | InterPro | tRNA aminoacylation | |
| GO:0007005 | ISO | PLAZA Integrative Orthology | mitochondrion organization | AT5G64050 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT5G64050 |
| GO:0048481 | ISO | PLAZA Integrative Orthology | plant ovule development | AT5G64050 |
| GO:0006424 | IBA IEA | GOA Database | glutamyl-tRNA aminoacylation | |
| GO:0006424 | IEA | InterPro | glutamyl-tRNA aminoacylation | |
| GO:0006418 | IEA | GOA Database | tRNA aminoacylation for protein translation | |
| GO:0006412 | IEA | GOA Database | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G64050 |
| GO:0004818 | IBA IEA | GOA Database | glutamate-tRNA ligase activity | |
| GO:0004818 | IEA | InterPro | glutamate-tRNA ligase activity | |
| GO:0008270 | IEA | GOA Database | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0000049 | IEA | GOA Database | tRNA binding | |
| GO:0000049 | IEA | InterPro | tRNA binding | |
| GO:0004812 | IEA | GOA Database | aminoacyl-tRNA ligase activity | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0016874 | IEA | GOA Database | ligase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0009570 | IEA | GOA Database | chloroplast stroma |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR020058 | Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| IPR008925 | Aminoacyl-tRNA synthetase, class I, anticodon-binding |
| IPR000924 | Glutamyl/glutaminyl-tRNA synthetase |
| IPR004527 | Glutamate-tRNA ligase, bacterial/mitochondrial |
| IPR033910 | Glutamyl-tRNA synthetase |
| IPR020751 | Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 |