Gene: Pp3c19_5200
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c19_5200
- Transcript Identifier Pp3c19_5200V3.3
- Gene Type Coding gene
- Location Chr19 : 2946765-2953308 : positive
Gene Family Information
- ID HOM05D003944
- #Genes/#Species 177/97
- Phylogenetic origin
- ID ORTHO05D005521
- #Genes/#Species 156/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c19_5200V3.3
- pacid 32937963
- alias Pp1s517_8V6
- alias Phypa_156248
- alias Phpat.019G017500
- uniprot A0A2K1IXA2
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006265 | IEA | GOA Database | DNA topological change | |
| GO:0006265 | IEA | InterPro | DNA topological change |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0034335 | ISO | PLAZA Integrative Orthology | DNA negative supercoiling activity | AT5G04130 |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0016853 | IEA | GOA Database | isomerase activity | |
| GO:0003916 | IEA | GOA Database | DNA topoisomerase activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0003918 | IEA | GOA Database | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | |
| GO:0003918 | IEA | InterPro | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G10270 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G10270 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G10270 |
| GO:0005694 | IEA | GOA Database | chromosome | |
| GO:0005694 | IEA | InterPro | chromosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002288 | DNA gyrase B subunit, C-terminal |
| IPR013759 | DNA topoisomerase, type IIA, subunit B, C-terminal |
| IPR003594 | Histidine kinase/HSP90-like ATPase |
| IPR036890 | Histidine kinase/HSP90-like ATPase superfamily |
| IPR013760 | DNA topoisomerase, type IIA-like domain superfamily |
| IPR020568 | Ribosomal protein S5 domain 2-type fold |
| IPR000565 | DNA topoisomerase, type IIA, subunit B |
| IPR006171 | TOPRIM domain |
| IPR014721 | Ribosomal protein S5 domain 2-type fold, subgroup |
| IPR034160 | DNA gyrase subunit B, TOPRIM domain |
| IPR011557 | DNA gyrase, subunit B |
| IPR001241 | DNA topoisomerase, type IIA |
| IPR013506 | DNA topoisomerase, type IIA, subunit B, domain 2 |
| Mapman id | Description |
|---|---|
| 13.5.3.2 | Cell cycle organisation.organellar DNA replication.DNA gyrase complex.subunit B |