Gene: Pp3c18_6100

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c18_6100
  • Transcript Identifier Pp3c18_6100V3.1
  • Gene Type Coding gene
  • Location Chr18 : 4448678-4460312 : positive

Gene Family Information

  • ID HOM05D004216
  • #Genes/#Species 168/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c18_6100V3.1
  • pacid 32983223
  • alias Phpat.018G019100
  • alias Phypa_142028
  • alias Pp1s185_43V6
  • uniprot A0A2K1J026

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006367
IBA
GOA Databasetranscription initiation from RNA polymerase II promoter

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008237
IEA
GOA Databasemetallopeptidase activity
GO:0008237
IEA
InterPrometallopeptidase activity
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003682
IBA
GOA Databasechromatin binding
GO:0000976
IBA
GOA Databasetranscription cis-regulatory region binding
GO:0016251
IBA
GOA DatabaseRNA polymerase II general transcription initiation factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005669
IBA
IEA
GOA Databasetranscription factor TFIID complex
GO:0005669
IEA
InterProtranscription factor TFIID complex
GO:0005634
IEA
GOA Databasenucleus
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G73960

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR042097 Aminopeptidase N-like , N-terminal
IPR037813 Transcription initiation factor TFIID subunit 2
IPR016024 Armadillo-type fold
IPR027268 Peptidase M4/M1, CTD superfamily
IPR014782 Peptidase M1, membrane alanine aminopeptidase
Mapman id Description
15.3.4.2.3 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TFIId complex.component TAF2