Gene: Pp3c18_22260

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c18_22260
  • Transcript Identifier Pp3c18_22260V3.3
  • Gene Type Coding gene
  • Location Chr18 : 15496764-15499146 : positive

Gene Family Information

  • ID HOM05D005740
  • #Genes/#Species 135/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c18_22260V3.3
  • pacid 32981346
  • alias Pp1s33_7V6
  • alias Phpat.018G076700
  • alias Phypa_120515
  • uniprot A0A2K1J211

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044238
IEA
GOA Databaseprimary metabolic process
GO:0044238
IEA
InterProprimary metabolic process
GO:0006417
IEA
GOA Databaseregulation of translation
GO:0045900
IBA
GOA Databasenegative regulation of translational elongation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043024
IBA
GOA Databaseribosomal small subunit binding
GO:0043022
IBA
GOA Databaseribosome binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G24490

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022627
IBA
GOA Databasecytosolic small ribosomal subunit
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G24490
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G24490
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT5G24490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003489 Ribosome hibernation promoting factor/RaiA
IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily
IPR036567 Ribosome hibernation promotion factor-like
IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal
Mapman id Description
17.7.2.3.1 Protein biosynthesis.organelle machinery.plastidial ribosome.plastidial ribosome-associated proteins.hibernation-promoting factor (PSRP1)