Gene: AT5G24490

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G24490
  • Transcript Identifier AT5G24490.1
  • Gene Type Coding gene
  • Location Chr5 : 8365690-8367178 : positive

Gene Family Information

  • ID HOM05D005740
  • #Genes/#Species 135/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G24490.1
  • uniprot Q94K97

Descriptions

  • Description 30S ribosomal protein
  • Computational description 30S ribosomal protein, putative; FUNCTIONS IN: structural constituent of ribosome, binding; INVOLVED IN: translation, primary metabolic process; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S30Ae/sigma 54 modulation protein (InterPro:IPR003489); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045900
IBA
Gene Ontologynegative regulation of translational elongation1
GO:0044238
IEA
Gene Ontologyprimary metabolic process
GO:0044238
IEA
InterProprimary metabolic process
GO:0006417
IEA
GOA Databaseregulation of translation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043022
IBA
Gene Ontologyribosome binding1
GO:0043024
IBA
Gene Ontologyribosomal small subunit binding1
GO:0003729
IDA
Gene OntologymRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
GOA Databaseribosome
GO:0009534
IDA
GOA Databasechloroplast thylakoid
GO:0009534
HDA
Gene Ontologychloroplast thylakoid3
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast4
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma3
GO:0022627
IBA
Gene Ontologycytosolic small ribosomal subunit1
GO:0009536
HDA
Gene Ontologyplastid5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily
IPR036567 Ribosome hibernation promotion factor-like
IPR003489 Ribosome hibernation promoting factor/RaiA
IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal
Mapman id Description
17.7.2.3.1 Protein biosynthesis.organelle machinery.plastidial ribosome.plastidial ribosome-associated proteins.hibernation-promoting factor (PSRP1)