Gene: Pp3c18_13990

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c18_13990
  • Transcript Identifier Pp3c18_13990V3.1
  • Gene Type Coding gene
  • Location Chr18 : 10077002-10078663 : negative

Gene Family Information

  • ID HOM05D000949
  • #Genes/#Species 633/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c18_13990V3.1
  • pacid 32982171
  • alias Phpat.018G046500
  • alias Pp1s3_426V6
  • alias Phypa_111923
  • uniprot A9RDT9

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045824
ISO
PLAZA Integrative Orthologynegative regulation of innate immune response AT1G17980
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT1G17980
GO:0008285
ISO
PLAZA Integrative Orthologynegative regulation of cell population proliferation AT1G17980
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT1G17980
GO:0048451
ISO
PLAZA Integrative Orthologypetal formation AT1G17980
GO:0006378
IBA
GOA DatabasemRNA polyadenylation
GO:0031123
IEA
GOA DatabaseRNA 3'-end processing
GO:0031123
IEA
InterProRNA 3'-end processing
GO:0043631
IEA
GOA DatabaseRNA polyadenylation
GO:0043631
IEA
InterProRNA polyadenylation
GO:0006397
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016740
IEA
GOA Databasetransferase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G06560
GO:0004652
IBA
IEA
GOA Databasepolynucleotide adenylyltransferase activity
GO:0004652
IEA
InterPropolynucleotide adenylyltransferase activity
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0016779
IEA
InterPronucleotidyltransferase activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005524
IEA
GOA DatabaseATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G06560
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043519 Nucleotidyltransferase superfamily
IPR011068 Nucleotidyltransferase, class I-like, C-terminal
IPR002934 Polymerase, nucleotidyl transferase domain
IPR007010 Poly(A) polymerase, RNA-binding domain
IPR014492 Poly(A) polymerase
IPR007012 Poly(A) polymerase, central domain
Mapman id Description
16.3.1.1.1 RNA processing.RNA 3'-end processing.mRNA polyadenylation.poly(A) RNA polymerase activity.poly(A) RNA polymerase