Gene: Pp3c18_12880

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c18_12880
  • Transcript Identifier Pp3c18_12880V3.9
  • Gene Type Coding gene
  • Location Chr18 : 9418530-9419549 : positive

Gene Family Information

  • ID HOM05D000243
  • #Genes/#Species 1731/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c18_12880V3.9
  • pacid 32982043
  • alias Phypa_112289
  • alias Phpat.018G041700
  • alias Pp1s3_539V6
  • uniprot A0A2K1J0V6

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT1G69600
GO:0009637
ISO
PLAZA Integrative Orthologyresponse to blue light AT5G39760
GO:0010431
ISO
PLAZA Integrative Orthologyseed maturation AT5G65410
GO:0019760
ISO
PLAZA Integrative Orthologyglucosinolate metabolic process AT3G28920
GO:0001173
ISO
PLAZA Integrative OrthologyDNA-templated transcriptional start site selection AT5G39760
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT1G69600
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin AT5G39760
GO:0010371
ISO
PLAZA Integrative Orthologyregulation of gibberellin biosynthetic process AT5G65410
GO:0006355
IBA
GOA Databaseregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G14687
GO:0008134
ISO
PLAZA Integrative Orthologytranscription factor binding AT5G39760
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT1G69600
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT1G69600
GO:0000976
IBA
GOA Databasetranscription cis-regulatory region binding
GO:0003700
IBA
GOA DatabaseDNA-binding transcription factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006456 ZF-HD homeobox protein, Cys/His-rich dimerisation domain
IPR006455 Homeodomain, ZF-HD class
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.3.12 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (zf-HD)