Gene: AT5G65410

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G65410
  • Transcript Identifier AT5G65410.1
  • Gene Type Coding gene
  • Location Chr5 : 26136179-26137018 : positive

Gene Family Information

  • ID HOM05D000243
  • #Genes/#Species 1731/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G65410.1
  • symbol HB25
  • Alias ATHB25,ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 25,ZFHD2,ZINC FINGER HOMEODOMAIN 2,ZHD1,ZINC FINGER HOMEODOMAIN 1
  • uniprot Q9FKP8

Descriptions

  • Description homeobox protein 25
  • Computational description homeobox protein 25 (HB25); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Zinc finger, C2H2-type (InterPro:IPR007087), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 22 (TAIR:AT4G24660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IMP
IBA
Gene Ontologyregulation of transcription, DNA-templated1 2
GO:0010371
IMP
Gene Ontologyregulation of gibberellin biosynthetic process2
GO:0010431
IMP
Gene Ontologyseed maturation2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042803
ISS
Gene Ontologyprotein homodimerization activity
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0000976
IPI
IBA
Gene Ontologytranscription cis-regulatory region binding1 4
GO:0003700
IBA
Gene OntologyDNA-binding transcription factor activity1
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISS, ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006456 ZF-HD homeobox protein, Cys/His-rich dimerisation domain
IPR009057 Homeobox-like domain superfamily
IPR006455 Homeodomain, ZF-HD class
Mapman id Description
15.5.3.12 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (zf-HD)