Gene: Pp3c17_5870
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c17_5870
- Transcript Identifier Pp3c17_5870V3.6
- Gene Type Coding gene
- Location Chr17 : 4445848-4447008 : negative
Gene Family Information
- ID HOM05D004769
- #Genes/#Species 154/96
- Phylogenetic origin
- ID ORTHO05D005605
- #Genes/#Species 155/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c17_5870V3.6
- pacid 32908372
- alias Pp1s26_95V6
- alias Phypa_177795
- alias Phpat.017G019600
- uniprot A0A2K1J2U2
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008380 | IEA | GOA Database | RNA splicing | |
| GO:0000398 | IEA | GOA Database | mRNA splicing, via spliceosome | |
| GO:0006397 | IEA | GOA Database | mRNA processing | |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT5G37370 |
| GO:0010226 | ISO | PLAZA Integrative Orthology | response to lithium ion | AT5G37370 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0071011 | IBA IEA | GOA Database | precatalytic spliceosome | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005681 | IEA | GOA Database | spliceosomal complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005037 | Pre-mRNA-splicing factor 38 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |