Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c17_5870 Physcomitrium patens HOM05D004769 ORTHO05D005605 9.7e-156 553.9 387 100.0
Pp3c14_14980 Physcomitrium patens HOM05D004769 ORTHO05D005605 8.9e-125 451.1 387 82.2
Pp3c14_14989 Physcomitrium patens HOM05D004769 ORTHO05D005605 8.1e-110 401.4 360 81.1
Gohir.A08G052900 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.7e-83 313.9 189 77.8
Gohir.D08G062500 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.7e-83 313.9 189 77.8
Gorai.004G064700 Gossypium raimondii HOM05D004769 ORTHO05D005605 1.7e-83 313.9 189 77.8
Phvul.008G239200 Phaseolus vulgaris HOM05D004769 ORTHO05D005605 1.7e-83 313.9 207 72.9
Cpa.g.sc178.7 Carica papaya HOM05D004769 ORTHO05D005605 4.9e-83 312.4 212 72.2
TAR375G0174 Trochodendron aralioides HOM05D004769 ORTHO05D005605 1.4e-82 310.8 205 74.6
VMungo0647G0921 Vigna mungo HOM05D004769 ORTHO05D005605 1.9e-82 310.5 203 73.4
PGR042G1215 Punica granatum HOM05D004769 ORTHO05D005605 2.4e-82 310.1 210 72.4
Nn1g02020 Nelumbo nucifera HOM05D004769 ORTHO05D005605 4.2e-82 309.3 207 72.5
Thecc.04G060900 Theobroma cacao HOM05D004769 ORTHO05D005605 4.2e-82 309.3 213 70.9
GSVIVG01026312001 Vitis vinifera HOM05D004769 ORTHO05D005605 4.2e-82 309.3 175 81.7
COL.COLO4_05842 Corchorus olitorius HOM05D004769 ORTHO05D005605 5.4e-82 308.9 205 73.7
RcHm_v2.0_Chr4g0398571 Rosa chinensis HOM05D004769 ORTHO05D005605 9.3e-82 308.1 175 82.3
Lalb_Chr17g0345901 Lupinus albus HOM05D004769 ORTHO05D005605 1.2e-81 307.8 208 71.6
CiPaw.03G077600 Carya illinoinensis HOM05D004769 ORTHO05D005605 2.1e-81 307.0 214 72.4
ATR0083G043 Amborella trichopoda HOM05D004769 ORTHO05D005605 2.7e-81 306.6 207 73.9
Eucgr.J01630 Eucalyptus grandis HOM05D004769 ORTHO05D005605 3.5e-81 306.2 211 70.6
Sc11g0004750 Simmondsia chinensis HOM05D004769 ORTHO05D005605 3.5e-81 306.2 213 70.4
Potri.004G075700 Populus trichocarpa HOM05D004769 ORTHO05D005605 4.6e-81 305.8 209 71.8
Hma1.2p1_0034F.1_g021310 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 6.0e-81 305.4 207 73.4
MBI04_g35346_MAGBIO Magnolia biondii HOM05D004769 ORTHO05D005605 7.9e-81 305.1 208 74.5
Aqoxy5G00268 Aquilegia oxysepala HOM05D004769 ORTHO05D005605 1.0e-80 304.7 193 76.7
FAN07G0829 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.0e-80 304.7 175 81.1
MD13G1237000 Malus domestica HOM05D004769 ORTHO05D005605 1.0e-80 304.7 210 71.9
Dinv19070 Davidia involucrata HOM05D004769 ORTHO05D005605 1.8e-80 303.9 219 71.2
Glyma.14G211600 Glycine max HOM05D004769 ORTHO05D005605 1.8e-80 303.9 204 72.1
CANSAT78G2338 Cannabis sativa HOM05D004769 ORTHO05D005605 2.3e-80 303.5 175 79.4
Lalb_Chr04g0251441 Lupinus albus HOM05D004769 ORTHO05D005605 2.3e-80 303.5 175 78.3
MD16G1242400 Malus domestica HOM05D004769 ORTHO05D005605 2.3e-80 303.5 210 71.4
PSO170G3102 Papaver somniferum HOM05D004769 ORTHO05D005605 2.3e-80 303.5 204 72.1
Medtr5g077180 Medicago truncatula HOM05D004769 ORTHO05D005605 3.0e-80 303.1 206 71.4
Haze_14305 Corylus avellana HOM05D004769 ORTHO05D005605 3.9e-80 302.8 173 79.8
PSO017G5633 Papaver somniferum HOM05D004769 ORTHO05D005605 3.9e-80 302.8 209 70.8
Potri.017G144121 Populus trichocarpa HOM05D004769 ORTHO05D005605 5.1e-80 302.4 209 70.3
FAN17G2568 Fragaria x ananassa HOM05D004769 ORTHO05D005605 8.7e-80 301.6 198 74.7
TPR.G9995 Trifolium pratense HOM05D004769 ORTHO05D005605 1.1e-79 301.2 216 69.0
TAR374G1377 Trochodendron aralioides HOM05D004769 ORTHO05D005605 1.1e-79 301.2 175 81.7
FvH4_4g06670 Fragaria vesca HOM05D004769 ORTHO05D005605 2.5e-79 300.1 211 71.1
Prupe.1G069400 Prunus persica HOM05D004769 ORTHO05D005605 3.3e-79 299.7 210 71.4
Cfa007768 Carpinus fangiana HOM05D004769 ORTHO05D005605 5.6e-79 298.9 214 69.6
Ca_05772_v3 Cicer arietinum L. HOM05D004769 ORTHO05D005605 5.6e-79 298.9 206 69.4
Zm00001eb377290 Zea mays HOM05D004769 ORTHO05D005605 5.6e-79 298.9 394 48.5
FAN22G0974 Fragaria x ananassa HOM05D004769 ORTHO05D005605 7.4e-79 298.5 211 71.6
Sabra04G0050400 Salix brachista HOM05D004769 ORTHO05D005605 7.4e-79 298.5 215 69.3
FAN12G3741 Fragaria x ananassa HOM05D004769 ORTHO05D005605 9.6e-79 298.1 211 70.6
Atru.chr1.1954 Acer truncatum HOM05D004769 ORTHO05D005605 1.3e-78 297.7 214 69.2
CsaV3_5G020660 Cucumis sativus L. HOM05D004769 ORTHO05D005605 1.3e-78 297.7 194 73.7
TWI74G1557 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 1.3e-78 297.7 210 68.6
arahy.Tifrunner.gnm1.ann1.SAK0JK Arachis hypogaea HOM05D004769 ORTHO05D005605 1.6e-78 297.4 205 70.7
MELO3C025080.2 Cucumis melo HOM05D004769 ORTHO05D005605 1.6e-78 297.4 209 70.8
ClCG01G008650 Citrullus lanatus HOM05D004769 ORTHO05D005605 2.8e-78 296.6 175 78.3
HanXRQChr08g0218471 Helianthus annuus HOM05D004769 ORTHO05D005605 3.7e-78 296.2 194 74.7
Lsat_1_v5_gn_8_18601 Lactuca sativa HOM05D004769 ORTHO05D005605 3.7e-78 296.2 207 72.5
HPP92_017811 Vanilla planifolia HOM05D004769 ORTHO05D005605 3.7e-78 296.2 187 73.3
Mapoly0017s0020 Marchantia polymorpha HOM05D004769 ORTHO05D005605 4.8e-78 295.8 176 78.4
Rhsim10G0183300 Rhododendron simsii HOM05D004769 ORTHO05D005605 1.1e-77 294.7 175 79.4
vmacro20487 Vaccinium macrocarpon HOM05D004769 ORTHO05D005605 1.4e-77 294.3 175 79.4
Os05g0178900 Oryza sativa ssp. japonica HOM05D004769 ORTHO05D005605 1.8e-77 293.9 218 66.5
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-77 293.5 211 70.6
Actinidia35715 Actinidia chinensis HOM05D004769 ORTHO05D005605 4.0e-77 292.7 209 69.9
CSS0001926 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 4.0e-77 292.7 209 70.3
AUR62017457 Chenopodium quinoa HOM05D004769 ORTHO05D005605 6.9e-77 292.0 389 52.7
AUR62032521 Chenopodium quinoa HOM05D004769 ORTHO05D005605 1.5e-76 290.8 203 70.0
Lj2C513G15 Lonicera japonica HOM05D004769 ORTHO05D005605 1.5e-76 290.8 216 68.1
TWI77G0470 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 1.5e-76 290.8 212 67.5
DCAR_028435 Daucus carota HOM05D004769 ORTHO05D005605 2.6e-76 290.0 213 69.5
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 2.6e-76 290.0 175 74.9
Cc07_g12960 Coffea canephora HOM05D004769 ORTHO05D005605 1.3e-75 287.7 207 68.1
SGA_v2.0_scaffold45G17131 Striga asiatica HOM05D004769 ORTHO05D005605 1.7e-75 287.3 172 78.5
unitig_748.g7024 Utricularia gibba HOM05D004769 ORTHO05D005605 1.7e-75 287.3 190 72.6
SMO351G0501 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 2.9e-75 286.6 175 74.3
SGA_v2.0_scaffold115G32089 Striga asiatica HOM05D004769 ORTHO05D005605 2.9e-75 286.6 172 77.9
THA.LOC104823824 Tarenaya hassleriana HOM05D004769 ORTHO05D005605 3.8e-75 286.2 391 58.8
Hma1.2p1_0158F.1_g069800 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 8.4e-75 285.0 210 68.1
MapolyY_B0025 Marchantia polymorpha HOM05D004769 ORTHO05D005605 8.4e-75 285.0 210 68.1
Sp7g05100 Schrenkiella parvula HOM05D004769 ORTHO05D005605 1.9e-74 283.9 208 68.3
CAN.G525.4 Capsicum annuum HOM05D004769 ORTHO05D005605 2.5e-74 283.5 210 66.2
Thhalv10027788m.g Eutrema salsugineum HOM05D004769 ORTHO05D005605 2.5e-74 283.5 206 68.4
Lj4A255T24 Lonicera japonica HOM05D004769 ORTHO05D005605 2.5e-74 283.5 207 67.6
Sed0006929 Sechium edule HOM05D004769 ORTHO05D005605 2.5e-74 283.5 210 67.6
Migut.K01113 Erythranthe guttata HOM05D004769 ORTHO05D005605 5.5e-74 282.3 179 73.2
AL7G46000 Arabidopsis lyrata HOM05D004769 ORTHO05D005605 9.3e-74 281.6 198 69.7
CARHR215720 Cardamine hirsuta HOM05D004769 ORTHO05D005605 9.3e-74 281.6 203 68.5
MSTRG.3686 Avicennia marina HOM05D004769 ORTHO05D005605 1.2e-73 281.2 394 57.9
Glyma.02G241900 Glycine max HOM05D004769 ORTHO05D005605 1.2e-73 281.2 252 58.7
EL10Ac6g13916 Beta vulgaris HOM05D004769 ORTHO05D005605 1.6e-73 280.8 419 55.1
Carub.0007s3249 Capsella rubella HOM05D004769 ORTHO05D005605 6.0e-73 278.9 175 74.3
A04p10540 Brassica napus HOM05D004769 ORTHO05D005605 1.3e-72 277.7 188 71.8
BraA04t16720Z Brassica rapa HOM05D004769 ORTHO05D005605 1.3e-72 277.7 188 71.8
Solyc04g014560.4 Solanum lycopersicum HOM05D004769 ORTHO05D005605 1.8e-72 277.3 209 66.5
Sopen04g006720 Solanum pennellii HOM05D004769 ORTHO05D005605 1.8e-72 277.3 209 66.5
PGSC0003DMG400023617 Solanum tuberosum HOM05D004769 ORTHO05D005605 2.3e-72 276.9 209 66.5
C04p44180 Brassica napus HOM05D004769 ORTHO05D005605 3.9e-72 276.2 204 68.6
Migut.H02243 Erythranthe guttata HOM05D004769 ORTHO05D005605 3.9e-72 276.2 387 56.3
Peaxi162Scf00442g00627 Petunia axillaris HOM05D004769 ORTHO05D005605 6.7e-72 275.4 209 66.0
BolC4t25993H Brassica oleracea HOM05D004769 ORTHO05D005605 8.7e-72 275.0 204 68.1
Nitab4.5_0000574g0160 Nicotiana tabacum HOM05D004769 ORTHO05D005605 8.7e-72 275.0 209 66.5
Ah.02g128700 Amaranthus hybridus HOM05D004769 ORTHO05D005605 1.1e-69 268.1 275 52.7
QL02p060102 Quercus lobata HOM05D004769 ORTHO05D005605 7.6e-68 261.9 293 51.2
CBR_g22246 Chara braunii HOM05D004769 ORTHO05D005605 3.8e-67 259.6 221 62.9
Oeu029083.1 Olea europaea HOM05D004769 ORTHO05D005605 3.8e-67 259.6 283 51.6
BcaC02g09560 Brassica carinata HOM05D004769 ORTHO05D005605 1.4e-66 257.7 204 64.7
Oeu032315.1 Olea europaea HOM05D004769 ORTHO05D005605 1.6e-65 254.2 460 47.0
LjContig00141g0012428 Lotus japonicus HOM05D004769 ORTHO05D005605 2.8e-62 243.4 215 55.3
SEGI_40758 Sequoiadendron giganteum HOM05D004769 ORTHO05D005605 3.4e-60 236.5 153 76.5
Dinv28230 Davidia involucrata HOM05D004769 ORTHO05D005605 3.0e-56 223.4 167 69.5
Sed0026946 Sechium edule HOM05D004769 ORTHO05D005605 3.9e-56 223.0 148 73.6
Cre03.g178300 Chlamydomonas reinhardtii HOM05D004769 ORTHO05D005605 3.4e-52 209.9 212 53.3
Nitab4.5_0005193g0040 Nicotiana tabacum HOM05D004769 ORTHO05D005605 1.2e-49 201.4 167 62.9
CDE02G1258 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 2.6e-47 193.7 146 69.2
CDE02G3274 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 5.7e-47 192.6 101 81.2
Zm00001eb283000 Zea mays HOM05D004769 ORTHO05D005605 1.4e-45 188.0 156 64.1
Duzib211G0206 Durio zibethinus HOM05D004769 ORTHO05D005605 4.5e-44 183.0 136 67.6
Ciclev10015797m.g Citrus clementina HOM05D004769 ORTHO05D005605 8.5e-43 178.7 181 57.5
MCO07G113 Micromonas commoda HOM05D004769 ORTHO05D005605 1.1e-42 178.3 163 52.1
Lalb_Chr10g0104091 Lupinus albus HOM05D004769 ORTHO05D005605 1.6e-41 174.5 95 76.8
SMO231G0026 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 2.1e-41 174.1 182 53.3
CSS0045560 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 9.7e-39 165.2 96 74.0
PRCOL_00000163 Prasinoderma coloniale HOM05D004769 ORTHO05D005605 9.7e-39 165.2 229 43.2
Manes.02G080000 Manihot esculenta HOM05D004769 ORTHO05D005605 2.4e-37 160.6 132 66.7
CDE02G0598 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 2.0e-36 157.5 106 65.1
AT5G37370 Arabidopsis thaliana HOM05D004769 ORTHO05D005605 1.2e-33 148.3 120 66.7
Psat2g044720 Pisum sativum HOM05D004769 ORTHO05D005605 8.8e-32 142.1 116 64.7
Ciclev10018227m.g Citrus clementina HOM05D004769 ORTHO05D005605 2.7e-28 130.6 73 76.7
Lalb_Chr10g0104101 Lupinus albus HOM05D004769 ORTHO05D005605 3.8e-27 126.7 115 61.7
Lj1g0013060 Lotus japonicus HOM05D004769 ORTHO05D005605 9.4e-26 122.1 121 52.1
ATR0127G005 Amborella trichopoda HOM05D004769 ORTHO05D005605 3.0e-24 117.1 77 75.3
Oeu048972.1 Olea europaea HOM05D004769 ORTHO05D005605 1.7e-22 111.3 58 81.0
CSS0036345 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 3.3e-18 97.1 62 79.0
Lj2g0009880 Lotus japonicus HOM05D004769 ORTHO05D005605 4.2e-18 96.7 54 72.2
CDE02G3573 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 1.2e-17 95.1 84 66.7
FAN07G1815 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.6e-17 93.6 107 56.1
SMO231G0020 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 6.1e-17 92.8 76 55.3
Lj1g0013083 Lotus japonicus HOM05D004769 ORTHO05D005605 8.0e-17 92.4 53 71.7
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.0e-16 90.5 88 64.8
SMO351G0097 Selaginella moellendorffii HOM05D007698 ORTHO05D009663 9.8e-15 85.5 79 49.4
HanXRQChr14g0429111 Helianthus annuus HOM05D004769 ORTHO05D005605 1.7e-14 84.7 45 80.0
HanXRQChr14g0429051 Helianthus annuus HOM05D004769 ORTHO05D005605 1.4e-13 81.6 45 77.8
Sed0001997 Sechium edule HOM05D004769 ORTHO05D005605 5.4e-13 79.7 48 70.8
Zm00001eb046660 Zea mays HOM05D004769 ORTHO05D005605 5.4e-13 79.7 43 79.1
AagrBONN_evm.TU.Sc2ySwM_344.2680 Anthoceros agrestis HOM05D004769 ORTHO05D005605 7.0e-13 79.3 261 55.9
Zm00001eb221230 Zea mays HOM05D004769 ORTHO05D005605 7.8e-12 75.9 42 78.6
Aa31LG9G17630 Aethionema arabicum HOM05D004769 ORTHO05D005605 1.0e-11 75.5 43 74.4
Gohir.A02G124601 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.7e-11 74.7 43 74.4
Zm00001eb361740 Zea mays HOM05D004769 ORTHO05D005605 2.9e-11 73.9 43 79.1
Zm00001eb313200 Zea mays HOM05D004769 ORTHO05D005605 1.1e-10 72.0 43 76.7
Actinidia28787 Actinidia chinensis HOM05D004769 ORTHO05D005605 2.1e-09 67.8 89 40.4


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