Gene: Pp3c16_5380

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c16_5380
  • Transcript Identifier Pp3c16_5380V3.1
  • Gene Type Coding gene
  • Location Chr16 : 3599458-3602169 : positive

Gene Family Information

  • ID HOM05D000509
  • #Genes/#Species 1053/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c16_5380V3.1
  • pacid 32984838
  • alias Phpat.016G019500
  • alias Pp1s15_437V6
  • uniprot A0A2K1J790

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005976
ISO
PLAZA Integrative Orthologypolysaccharide metabolic process AT1G33800
GO:0006479
ISO
PLAZA Integrative Orthologyprotein methylation AT1G67330
GO:0009808
ISO
PLAZA Integrative Orthologylignin metabolic process AT1G33800
GO:0045491
ISO
PLAZA Integrative Orthologyxylan metabolic process AT1G09610
GO:0009827
ISO
PLAZA Integrative Orthologyplant-type cell wall modification AT1G67330
GO:0045492
IBA
IEA
GOA Databasexylan biosynthetic process
GO:0045492
IEA
InterProxylan biosynthetic process
GO:0009834
IBA
GOA Databaseplant-type secondary cell wall biogenesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030775
ISO
PLAZA Integrative Orthologyglucuronoxylan 4-O-methyltransferase activity AT1G09610
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G27930

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT1G67330
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT1G67330
GO:0005794
IBA
GOA DatabaseGolgi apparatus
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0000139
IEA
GOA DatabaseGolgi membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006514 IRX15/IRX15L/IGXM
IPR021148 Polysaccharide biosynthesis domain
Mapman id Description
35.1 not assigned.annotated