Gene: AT1G27930

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G27930
  • Transcript Identifier AT1G27930.1
  • Gene Type Coding gene
  • Location Chr1 : 9731510-9732379 : negative

Gene Family Information

  • ID HOM05D000509
  • #Genes/#Species 1053/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G27930.1
  • uniprot Q9C7F9

Descriptions

  • Description glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
  • Computational description FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT1G67330.1); Has 251 Blast hits to 250 proteins in 20 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 239; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045492
IEA
GOA Databasexylan biosynthetic process
GO:0045492
IBA
Gene Ontologyxylan biosynthetic process1
GO:0045492
IEA
InterProxylan biosynthetic process
GO:0032259
IEA
GOA Databasemethylation
GO:0009834
IBA
Gene Ontologyplant-type secondary cell wall biogenesis1
GO:0009827
IMP
Gene Ontologyplant-type cell wall modification2
GO:0006479
IMP
Gene Ontologyprotein methylation2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0030775
IMP
Gene Ontologyglucuronoxylan 4-O-methyltransferase activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005794
IDA, HDA
IBA
Gene OntologyGolgi apparatus1 2 4
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005802
IDA
GOA Databasetrans-Golgi network
GO:0005802
HDA
Gene Ontologytrans-Golgi network5
GO:0005768
IDA
GOA Databaseendosome
GO:0005768
HDA
Gene Ontologyendosome5
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0005797
HDA
Gene OntologyGolgi medial cisterna6
GO:0005634
HDA
Gene Ontologynucleus7

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021148 Polysaccharide biosynthesis domain
IPR006514 IRX15/IRX15L/IGXM
Mapman id Description
35.1 not assigned.annotated