Gene: Pp3c16_13280

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c16_13280
  • Transcript Identifier Pp3c16_13280V3.2
  • Gene Type Coding gene
  • Location Chr16 : 8361023-8361856 : negative

Gene Family Information

  • ID HOM05D000078
  • #Genes/#Species 3763/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c16_13280V3.2
  • pacid 32984563
  • alias Phypa_27022
  • alias Phpat.016G054100
  • alias Pp1s15_186V6
  • uniprot A0A2K1J8F6

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009620
ISO
PLAZA Integrative Orthologyresponse to fungus AT1G22810
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G46768
GO:0034605
ISO
PLAZA Integrative Orthologycellular response to heat AT1G21910
GO:0071497
ISO
PLAZA Integrative Orthologycellular response to freezing AT1G21910
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT4G36900
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT1G46768
GO:0019760
ISO
PLAZA Integrative Orthologyglucosinolate metabolic process AT1G12630
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT5G52020
GO:0009863
ISO
PLAZA Integrative Orthologysalicylic acid mediated signaling pathway AT1G44830
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT1G74930
GO:0009861
ISO
PLAZA Integrative Orthologyjasmonic acid and ethylene-dependent systemic resistance AT1G44830
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT3G50260
GO:0009617
ISO
PLAZA Integrative Orthologyresponse to bacterium AT3G50260
GO:0045088
ISO
PLAZA Integrative Orthologyregulation of innate immune response AT1G44830
GO:0010941
ISO
PLAZA Integrative Orthologyregulation of cell death AT3G50260
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT1G71520
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT1G74930
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:1900030
ISO
PLAZA Integrative Orthologyregulation of pectin biosynthetic process AT1G44830
GO:0010087
ISO
PLAZA Integrative Orthologyphloem or xylem histogenesis AT1G74930
GO:0009753
ISO
PLAZA Integrative Orthologyresponse to jasmonic acid AT1G21910
GO:1900057
ISO
PLAZA Integrative Orthologypositive regulation of leaf senescence AT4G36900
GO:0009751
ISO
PLAZA Integrative Orthologyresponse to salicylic acid AT1G21910
GO:0042631
ISO
PLAZA Integrative Orthologycellular response to water deprivation AT1G22810
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc02g093130.3
GO:0002213
ISO
PLAZA Integrative Orthologydefense response to insect AT1G74930

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G12630

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G22810
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
IPR016177 DNA-binding domain superfamily
Mapman id Description
15.5.7.2 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (DREB)