Gene: Pp3c15_21890

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c15_21890
  • Transcript Identifier Pp3c15_21890V3.2
  • Gene Type Coding gene
  • Location Chr15 : 14191657-14193988 : positive

Gene Family Information

  • ID HOM05D005088
  • #Genes/#Species 147/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c15_21890V3.2
  • pacid 32926892
  • alias Pp1s271_50V6
  • alias Phypa_110470
  • alias Phpat.015G081100
  • uniprot A9TNB0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034462
IBA
GOA Databasesmall-subunit processome assembly
GO:0000447
IBA
GOA Databaseendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472
IBA
GOA Databaseendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480
IBA
GOA Databaseendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IBA
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IBA
IEA
GOA Databasenucleolus
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
IPR039119 ABT1/Esf2
IPR034353 ABT1/ESF2, RNA recognition motif
Mapman id Description
35.1 not assigned.annotated