Gene: Pp3c15_19420

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c15_19420
  • Transcript Identifier Pp3c15_19420V3.1
  • Gene Type Coding gene
  • Location Chr15 : 12767482-12769221 : positive

Gene Family Information

  • ID HOM05D000228
  • #Genes/#Species 1809/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c15_19420V3.1
  • pacid 32927520
  • uniprot A0A2K1JDR5

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006366
IEA
GOA Databasetranscription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003899
IBA
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0001055
IBA
GOA DatabaseRNA polymerase II activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005665
IBA
GOA DatabaseRNA polymerase II, core complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044893 RNA polymerase Rpb1, clamp domain superfamily
IPR000722 RNA polymerase, alpha subunit
IPR006592 RNA polymerase, N-terminal
IPR007066 RNA polymerase Rpb1, domain 3
IPR038120 RNA polymerase Rpb1, funnel domain superfamily
IPR007083 RNA polymerase Rpb1, domain 4
Mapman id Description
35.1 not assigned.annotated