Gene: Pp3c13_5280
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c13_5280
- Transcript Identifier Pp3c13_5280V3.4
- Gene Type Coding gene
- Location Chr13 : 3342819-3345959 : positive
Gene Family Information
- ID HOM05D000776
- #Genes/#Species 759/100
- Phylogenetic origin
- ID ORTHO05D001624
- #Genes/#Species 379/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c13_5280V3.4
- pacid 32929919
- alias Phypa_167038
- alias Pp1s133_100V6
- alias Phpat.013G017700
- uniprot A0A2K1JKY5
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009832 | ISO | PLAZA Integrative Orthology | plant-type cell wall biogenesis | AT1G64440 |
| GO:0042546 | ISO | PLAZA Integrative Orthology | cell wall biogenesis | AT4G23920 |
| GO:0010246 | ISO | PLAZA Integrative Orthology | rhamnogalacturonan I biosynthetic process | AT1G64440 |
| GO:0010306 | ISO | PLAZA Integrative Orthology | rhamnogalacturonan II biosynthetic process | AT1G64440 |
| GO:0009969 | ISO | PLAZA Integrative Orthology | xyloglucan biosynthetic process | AT1G64440 |
| GO:0010053 | ISO | PLAZA Integrative Orthology | root epidermal cell differentiation | AT1G64440 |
| GO:0006364 | IBA | GOA Database | rRNA processing | |
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0006012 | IEA | GOA Database | galactose metabolic process | |
| GO:0006012 | IEA | InterPro | galactose metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046983 | ISO | PLAZA Integrative Orthology | protein dimerization activity | AT4G23920 |
| GO:0003978 | IEA | GOA Database | UDP-glucose 4-epimerase activity | |
| GO:0003978 | IEA | InterPro | UDP-glucose 4-epimerase activity | |
| GO:0003723 | IBA | GOA Database | RNA binding | |
| GO:0016853 | IEA | GOA Database | isomerase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | IBA | GOA Database | cytosol | |
| GO:0005795 | ISO | PLAZA Integrative Orthology | Golgi stack | AT1G64440 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 3.13.8 | Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucose 4-epimerase |