Gene: Pp3c13_20600

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c13_20600
  • Transcript Identifier Pp3c13_20600V3.1
  • Gene Type Coding gene
  • Location Chr13 : 14457774-14459811 : negative

Gene Family Information

  • ID HOM05D000727
  • #Genes/#Species 800/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c13_20600V3.1
  • pacid 32930147
  • alias Pp1s223_15V6
  • alias Phypa_169862
  • alias Phpat.013G070700
  • uniprot A9Q9K8

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010197
ISO
PLAZA Integrative Orthologypolar nucleus fusion AT5G23420
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated Zm00001eb271910
GO:0006333
ISO
PLAZA Integrative Orthologychromatin assembly or disassembly AT2G17560
GO:0000741
ISO
PLAZA Integrative Orthologykaryogamy AT5G23420

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0030527
ISO
PLAZA Integrative Orthologystructural constituent of chromatin AT2G17560
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding Zm00001eb271910
GO:0003682
ISO
PLAZA Integrative Orthologychromatin binding AT2G17560

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G17560
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G35570
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT2G17560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009071 High mobility group box domain
IPR031061 High mobility group protein HMGB, plant
IPR036910 High mobility group box domain superfamily
Mapman id Description
12.1.3.1 Chromatin organisation.chromatin structure.DNA bending.architectural protein (HMG-B)