Gene: Pp3c12_17610

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c12_17610
  • Transcript Identifier Pp3c12_17610V3.2
  • Gene Type Coding gene
  • Location Chr12 : 11572757-11573855 : positive

Gene Family Information

  • ID HOM05D000221
  • #Genes/#Species 1858/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c12_17610V3.2
  • pacid 32974779
  • alias Phpat.012G063200
  • alias Pp1s46_245V6
  • alias Phypa_181052
  • uniprot A9S412

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016048
ISO
PLAZA Integrative Orthologydetection of temperature stimulus AT3G54560
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT1G52740
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT3G54560
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT2G38810
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT3G54560
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT3G54560
GO:0009266
ISO
PLAZA Integrative Orthologyresponse to temperature stimulus AT1G52740
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT2G38810
GO:0044030
ISO
PLAZA Integrative Orthologyregulation of DNA methylation AT2G38810
GO:0006342
IBA
GOA Databasechromatin silencing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G52740
GO:0003677
IBA
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0046982
IEA
GOA Databaseprotein heterodimerization activity
GO:0046982
IEA
InterProprotein heterodimerization activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G52740
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G38810
GO:0000786
IEA
GOA Databasenucleosome
GO:0000786
IEA
InterPronucleosome
GO:0005634
IEA
GOA Databasenucleus
GO:0005694
IEA
GOA Databasechromosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007125 Histone H2A/H2B/H3
IPR009072 Histone-fold
IPR032454 Histone H2A, C-terminal domain
IPR002119 Histone H2A
Mapman id Description
12.1.1.1 Chromatin organisation.chromatin structure.DNA wrapping.histone (H2A)