Gene: Pp3c12_10960

General Information

Structural Information

Species Physcomitrium patens
Gene Identifier Pp3c12_10960
Transcript Identifier Pp3c12_10960V3.2
Gene Type Coding gene
Location Chr12 : 7379485-7384252 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000561
#Genes/#Species 984/100
Phylogenetic origin

ID ORTHO05D000514
#Genes/#Species 826/99
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

name Pp3c12_10960V3.2
pacid 32972406
alias Phypa_227053
alias Pp1s391_69V6
alias Phpat.012G039800
uniprot A0A2K1JQB4

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0034063	ISO	PLAZA Integrative Orthology	stress granule assembly	AT3G19130
GO:0010193	ISO	PLAZA Integrative Orthology	response to ozone	AT1G11650
GO:0051028	ISO	PLAZA Integrative Orthology	mRNA transport	Os04g0625800

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0003723	IEA	GOA Database	RNA binding
GO:0003729	IBA	GOA Database	mRNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G19130

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005829	IBA	GOA Database	cytosol
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	Os04g0625800
GO:0010494	ISO	PLAZA Integrative Orthology	cytoplasmic stress granule	AT3G19130
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	Os04g0625800

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR035979	RNA-binding domain superfamily
IPR000504	RNA recognition motif domain
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily

Mapman id	Description
16.8.4	RNA processing.mRNA sequestration.mRNA-binding regulatory factor (RBP45/47)