Gene: Pp3c11_12270
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c11_12270
- Transcript Identifier Pp3c11_12270V3.1
- Gene Type Coding gene
- Location Chr11 : 7916833-7925156 : positive
Gene Family Information
- ID HOM05D000528
- #Genes/#Species 1033/100
- Phylogenetic origin
- ID ORTHO05D000999
- #Genes/#Species 524/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c11_12270V3.1
- pacid 32959573
- alias Pp1s11_55V6
- alias Phpat.011G046200
- alias Phypa_175154
- uniprot A0A2K1JUG3
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032012 | IEA | GOA Database | regulation of ARF protein signal transduction | |
| GO:0032012 | IEA | InterPro | regulation of ARF protein signal transduction | |
| GO:0050790 | IEA | GOA Database | regulation of catalytic activity | |
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0016192 | ISO | PLAZA Integrative Orthology | vesicle-mediated transport | AT1G01960 |
| GO:0009561 | ISO | PLAZA Integrative Orthology | megagametogenesis | AT1G01960 |
| GO:0043001 | ISO | PLAZA Integrative Orthology | Golgi to plasma membrane protein transport | AT3G60860 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005085 | IEA | GOA Database | guanyl-nucleotide exchange factor activity | |
| GO:0005085 | IEA | InterPro | guanyl-nucleotide exchange factor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005829 | IEA | GOA Database | cytosol | |
| GO:0005802 | IBA | GOA Database | trans-Golgi network | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G01960 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G38200 |
| GO:0005769 | ISO | PLAZA Integrative Orthology | early endosome | AT3G60860 |
| GO:0032588 | ISO | PLAZA Integrative Orthology | trans-Golgi network membrane | AT4G35380 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR023394 | Sec7, C-terminal domain superfamily |
| IPR015403 | Sec7, C-terminal |
| IPR032691 | Guanine nucleotide exchange factor, N-terminal |
| IPR000904 | Sec7 domain |
| IPR032817 | Mon2, C-terminal |
| IPR032629 | Mon2, dimerisation and cyclophilin-binding domain |
| IPR035999 | Sec7 domain superfamily |
| IPR016024 | Armadillo-type fold |
| Mapman id | Description |
|---|---|
| 22.3.2.2.2 | Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase guanyl-nucleotide exchange.ARF-GEF factor (BIG) |