Gene: AT4G38200

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G38200
  • Transcript Identifier AT4G38200.1
  • Gene Type Coding gene
  • Location Chr4 : 17915293-17922502 : positive

Gene Family Information

  • ID HOM05D000528
  • #Genes/#Species 1033/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G38200.1
  • uniprot F4JSZ5

Descriptions

  • Description SEC7-like guanine nucleotide exchange family protein
  • Computational description SEC7-like guanine nucleotide exchange family protein; FUNCTIONS IN: binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity; INVOLVED IN: regulation of ARF protein signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT4G35380.1); Has 2912 Blast hits to 2618 proteins in 244 species: Archae - 0; Bacteria - 32; Metazoa - 1541; Fungi - 604; Plants - 295; Viruses - 0; Other Eukaryotes - 440 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032012
IEA
Gene Ontologyregulation of ARF protein signal transduction
GO:0032012
IEA
InterProregulation of ARF protein signal transduction
GO:0050790
IEA
GOA Databaseregulation of catalytic activity
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005085
IEA
GOA Databaseguanyl-nucleotide exchange factor activity
GO:0005085
IEA
InterProguanyl-nucleotide exchange factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast1
GO:0005802
IBA
Gene Ontologytrans-Golgi network2
GO:0016020
IEA
GOA Databasemembrane
GO:0005829
IEA
GOA Databasecytosol
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011989 Armadillo-like helical
IPR000904 Sec7 domain
IPR032629 Mon2, dimerisation and cyclophilin-binding domain
IPR016024 Armadillo-type fold
IPR023394 Sec7, C-terminal domain superfamily
IPR015403 Sec7, C-terminal
IPR035999 Sec7 domain superfamily
IPR032691 Guanine nucleotide exchange factor, N-terminal
Mapman id Description
22.3.2.2.2 Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase guanyl-nucleotide exchange.ARF-GEF factor (BIG)