Gene: Pp3c11_1000

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c11_1000
  • Transcript Identifier Pp3c11_1000V3.1
  • Gene Type Coding gene
  • Location Chr11 : 458133-463681 : positive

Gene Family Information

  • ID HOM05D002340
  • #Genes/#Species 290/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c11_1000V3.1
  • pacid 32958440
  • alias Pp1s39_120V6
  • alias Phpat.011G003800
  • alias Phypa_122270
  • uniprot A0A2K1JSZ7

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G26300
GO:0006420
IBA
IEA
GOA Databasearginyl-tRNA aminoacylation
GO:0006420
IEA
InterProarginyl-tRNA aminoacylation
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0004814
IBA
IEA
GOA Databasearginine-tRNA ligase activity
GO:0004814
IEA
InterProarginine-tRNA ligase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0016874
IEA
GOA Databaseligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G26300
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G26300
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G26300
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005148 Arginyl tRNA synthetase N-terminal domain
IPR035684 Arginyl-tRNA synthetase, catalytic core domain
IPR001278 Arginine-tRNA ligase
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
IPR008909 DALR anticodon binding
IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily
Mapman id Description
17.2.2 Protein biosynthesis.aminoacyl-tRNA synthetase activities.arginine-tRNA ligase