Gene: Potri.019G055000
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.019G055000
- Transcript Identifier Potri.019G055000.6
- Gene Type Coding gene
- Location Chr19 : 9291916-9297766 : negative
Gene Family Information
- ID HOM05D004200
- #Genes/#Species 168/97
- Phylogenetic origin
- ID ORTHO05D004996
- #Genes/#Species 166/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.019G055000.v4.1
- pacid 42773443
- synonym gw1.XIX.1529.1
Descriptions
- Description PTHR12375//PTHR12375:SF32 - RNA-BINDING PROTEIN LUC7-RELATED // SUBFAMILY NOT NAMED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006376 | IEA | InterPro | mRNA splice site selection | |
| GO:0009567 | ISO | PLAZA Integrative Orthology | double fertilization forming a zygote and endosperm | AT3G03340 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | IEA | InterPro | mRNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005685 | IEA | InterPro | U1 snRNP | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G03340 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004882 | Luc7-related |
| Mapman id | Description |
|---|---|
| 16.2.1.1.5.2 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).accessory protein activities.pre-mRNA-processing protein (LUC7) |