Gene: AT3G03340

General Information

Structural Information

Species Arabidopsis thaliana
Gene Identifier AT3G03340
Transcript Identifier AT3G03340.2
Gene Type Coding gene
Location Chr3 : 786205-789762 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D004200
#Genes/#Species 168/97
Phylogenetic origin

ID ORTHO05D004996
#Genes/#Species 166/97
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid AT3G03340.2
symbol UNE6
full_name unfertilized embryo sac 6
uniprot F4IZU3

Descriptions

Description LUC7 related protein

Computational description unfertilized embryo sac 6 (UNE6); CONTAINS InterPro DOMAIN/s: LUC7 related (InterPro:IPR004882); BEST Arabidopsis thaliana protein match is: LUC7 related protein (TAIR:AT5G17440.1); Has 25128 Blast hits to 10547 proteins in 429 species: Archae - 23; Bacteria - 333; Metazoa - 14905; Fungi - 3154; Plants - 2060; Viruses - 86; Other Eukaryotes - 4567 (source: NCBI BLink).

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Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006376	IBA IEA	Gene Ontology	mRNA splice site selection	1
GO:0006376	IEA	InterPro	mRNA splice site selection
GO:0009567	IMP	Gene Ontology	double fertilization forming a zygote and endosperm	2

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003729	IBA IEA	Gene Ontology	mRNA binding	1
GO:0003729	IEA	InterPro	mRNA binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISM	Gene Ontology	nucleus
GO:0005685	IBA IEA	Gene Ontology	U1 snRNP	1
GO:0005685	IEA	InterPro	U1 snRNP
GO:0071004	IBA	Gene Ontology	U2-type prespliceosome	1
GO:0005829	IDA	GOA Database	cytosol

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR004882	Luc7-related

Mapman id	Description
16.2.1.1.5.2	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).accessory protein activities.pre-mRNA-processing protein (LUC7)