Gene: Potri.019G016500
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.019G016500
- Transcript Identifier Potri.019G016500.1
- Gene Type Coding gene
- Location Chr19 : 2680127-2684816 : positive
Gene Family Information
- ID HOM05D000067
- #Genes/#Species 3957/93
- Phylogenetic origin
- ID ORTHO05D000097
- #Genes/#Species 2160/88
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Potri.019G016500.v4.1
- pacid 42774629
- synonym POPTR_0019s03310
Descriptions
- Description 4.2.3.8 - Casbene synthase / Casbene synthetase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016102 | IEA | InterPro | diterpenoid biosynthetic process | |
| GO:0016106 | ISO | PLAZA Integrative Orthology | sesquiterpenoid biosynthetic process | AT5G44630 |
| GO:0051762 | ISO | PLAZA Integrative Orthology | sesquiterpene biosynthetic process | AT5G44630 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT4G13280 |
| GO:0080027 | ISO | PLAZA Integrative Orthology | response to herbivore | AT5G23960 |
| GO:0016114 | ISO | PLAZA Integrative Orthology | terpenoid biosynthetic process | AT1G33750 |
| GO:0045338 | ISO | PLAZA Integrative Orthology | farnesyl diphosphate metabolic process | AT4G13280 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010333 | IEA | InterPro | terpene synthase activity | |
| GO:0016829 | IEA | InterPro | lyase activity | |
| GO:0000287 | IEA | InterPro | magnesium ion binding | |
| GO:0080016 | ISO | PLAZA Integrative Orthology | (-)-E-beta-caryophyllene synthase activity | AT5G23960 |
| GO:0080017 | ISO | PLAZA Integrative Orthology | alpha-humulene synthase activity | AT5G23960 |
| GO:0009975 | ISO | PLAZA Integrative Orthology | cyclase activity | AT4G13280 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005777 | ISO | PLAZA Integrative Orthology | peroxisome | AT4G13280 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G44630 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR008930 | Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid |
| IPR034741 | Terpene cyclase-like 1, C-terminal domain |
| IPR036965 | Terpene synthase, N-terminal domain superfamily |
| IPR005630 | Terpene synthase, metal-binding domain |
| IPR008949 | Isoprenoid synthase domain superfamily |
| IPR001906 | Terpene synthase, N-terminal domain |
| IPR044814 | Terpene cyclases, class 1, plant |
| Mapman id | Description |
|---|---|
| 9.1.4.2 | Secondary metabolism.terpenoids.terpene biosynthesis.mono-/sesquiterpene-/diterpene synthase |