Gene: AT4G13280

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G13280
  • Transcript Identifier AT4G13280.1
  • Gene Type Coding gene
  • Location Chr4 : 7733161-7736745 : negative

Gene Family Information

  • ID HOM05D000067
  • #Genes/#Species 3957/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G13280.1
  • symbol TPS12
  • Alias ATTPS12
  • uniprot Q9T0J9

Descriptions

  • Description terpenoid synthase 12
  • Computational description terpenoid synthase 12 (TPS12); FUNCTIONS IN: cyclase activity; INVOLVED IN: response to wounding, sesquiterpenoid biosynthetic process, farnesyl diphosphate metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: root cortex, stigma, hydathode; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpenoid synthase 13 (TAIR:AT4G13300.1); Has 1634 Blast hits to 1617 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1630; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016102
IEA
Gene Ontologyditerpenoid biosynthetic process
GO:0016102
IEA
InterProditerpenoid biosynthetic process
GO:0016114
IEA
GOA Databaseterpenoid biosynthetic process
GO:0051762
IBA
Gene Ontologysesquiterpene biosynthetic process1
GO:0045338
IDA
Gene Ontologyfarnesyl diphosphate metabolic process2
GO:0016106
IDA
Gene Ontologysesquiterpenoid biosynthetic process2
GO:0009611
IEP
Gene Ontologyresponse to wounding2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009975
IDA
IBA
Gene Ontologycyclase activity1 2
GO:0016829
IEA
GOA Databaselyase activity
GO:0016829
IEA
InterProlyase activity
GO:0000287
IEA
Gene Ontologymagnesium ion binding
GO:0000287
IEA
InterPromagnesium ion binding
GO:0010333
IEA
Gene Ontologyterpene synthase activity
GO:0010333
IEA
InterProterpene synthase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0052683
IEA
Gene Ontology(Z)-gamma-bisabolene synthase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005777
IDA
Gene Ontologyperoxisome3
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR008949 Isoprenoid synthase domain superfamily
IPR044814 Terpene cyclases, class 1, plant
IPR005630 Terpene synthase, metal-binding domain
IPR036965 Terpene synthase, N-terminal domain superfamily
IPR001906 Terpene synthase, N-terminal domain
Mapman id Description
9.1.4.2 Secondary metabolism.terpenoids.terpene biosynthesis.mono-/sesquiterpene-/diterpene synthase