Gene: Potri.012G034200
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.012G034200
- Transcript Identifier Potri.012G034200.1
- Gene Type Coding gene
- Location Chr12 : 3080214-3084547 : positive
Gene Family Information
- ID HOM05D000113
- #Genes/#Species 2932/100
- Phylogenetic origin
- ID ORTHO05D003010
- #Genes/#Species 249/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.012G034200.v4.1
- pacid 42782506
- synonym POPTR_0012s01120
Descriptions
- Description PTHR18934//PTHR18934:SF120 - ATP-DEPENDENT RNA HELICASE // SUBFAMILY NOT NAMED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004386 | IEA | InterPro | helicase activity | |
| GO:0003724 | IEA | InterPro | RNA helicase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011709 | Domain of unknown function DUF1605 |
| IPR022967 | RNA-binding domain, S1 |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR007502 | Helicase-associated domain |
| IPR001650 | Helicase, C-terminal |
| IPR003029 | S1 domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR044762 | DHX8/ Prp22, DEXH-box helicase domain |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |